Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7454 | 22585;22586;22587 | chr2:178722427;178722426;178722425 | chr2:179587154;179587153;179587152 |
N2AB | 7137 | 21634;21635;21636 | chr2:178722427;178722426;178722425 | chr2:179587154;179587153;179587152 |
N2A | 6210 | 18853;18854;18855 | chr2:178722427;178722426;178722425 | chr2:179587154;179587153;179587152 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs727504464 | -1.295 | None | N | 0.233 | 0.155 | 0.19670166235 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/K | rs727504464 | -1.295 | None | N | 0.233 | 0.155 | 0.19670166235 | gnomAD-4.0.0 | 5.47466E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19703E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6123 | likely_pathogenic | 0.6131 | pathogenic | -1.271 | Destabilizing | 0.035 | N | 0.505 | neutral | None | None | None | None | N |
R/C | 0.2859 | likely_benign | 0.2392 | benign | -1.151 | Destabilizing | 0.935 | D | 0.621 | neutral | None | None | None | None | N |
R/D | 0.8994 | likely_pathogenic | 0.9046 | pathogenic | -0.117 | Destabilizing | 0.149 | N | 0.593 | neutral | None | None | None | None | N |
R/E | 0.5136 | ambiguous | 0.5283 | ambiguous | 0.032 | Stabilizing | 0.035 | N | 0.559 | neutral | None | None | None | None | N |
R/F | 0.7321 | likely_pathogenic | 0.7173 | pathogenic | -1.049 | Destabilizing | 0.791 | D | 0.619 | neutral | None | None | None | None | N |
R/G | 0.5362 | ambiguous | 0.5482 | ambiguous | -1.596 | Destabilizing | 0.117 | N | 0.553 | neutral | N | 0.49750834 | None | None | N |
R/H | 0.1291 | likely_benign | 0.1327 | benign | -1.851 | Destabilizing | 0.555 | D | 0.535 | neutral | None | None | None | None | N |
R/I | 0.4303 | ambiguous | 0.4087 | ambiguous | -0.381 | Destabilizing | 0.484 | N | 0.606 | neutral | N | 0.500355496 | None | None | N |
R/K | 0.0794 | likely_benign | 0.0836 | benign | -1.002 | Destabilizing | None | N | 0.233 | neutral | N | 0.37777556 | None | None | N |
R/L | 0.3361 | likely_benign | 0.3173 | benign | -0.381 | Destabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
R/M | 0.3918 | ambiguous | 0.3856 | ambiguous | -0.679 | Destabilizing | 0.791 | D | 0.587 | neutral | None | None | None | None | N |
R/N | 0.8017 | likely_pathogenic | 0.8106 | pathogenic | -0.54 | Destabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
R/P | 0.9593 | likely_pathogenic | 0.9681 | pathogenic | -0.659 | Destabilizing | 0.555 | D | 0.609 | neutral | None | None | None | None | N |
R/Q | 0.1287 | likely_benign | 0.1262 | benign | -0.686 | Destabilizing | 0.081 | N | 0.599 | neutral | None | None | None | None | N |
R/S | 0.6992 | likely_pathogenic | 0.7067 | pathogenic | -1.471 | Destabilizing | 0.062 | N | 0.523 | neutral | N | 0.510079186 | None | None | N |
R/T | 0.5305 | ambiguous | 0.543 | ambiguous | -1.119 | Destabilizing | 0.117 | N | 0.532 | neutral | N | 0.521435492 | None | None | N |
R/V | 0.5353 | ambiguous | 0.5127 | ambiguous | -0.659 | Destabilizing | 0.38 | N | 0.601 | neutral | None | None | None | None | N |
R/W | 0.3096 | likely_benign | 0.2964 | benign | -0.614 | Destabilizing | 0.935 | D | 0.644 | neutral | None | None | None | None | N |
R/Y | 0.5771 | likely_pathogenic | 0.5581 | ambiguous | -0.368 | Destabilizing | 0.791 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.