Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7457 | 22594;22595;22596 | chr2:178722418;178722417;178722416 | chr2:179587145;179587144;179587143 |
N2AB | 7140 | 21643;21644;21645 | chr2:178722418;178722417;178722416 | chr2:179587145;179587144;179587143 |
N2A | 6213 | 18862;18863;18864 | chr2:178722418;178722417;178722416 | chr2:179587145;179587144;179587143 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1365674340 | -0.066 | 0.309 | N | 0.347 | 0.139 | 0.43126412278 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1365674340 | -0.066 | 0.309 | N | 0.347 | 0.139 | 0.43126412278 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1365674340 | -0.066 | 0.309 | N | 0.347 | 0.139 | 0.43126412278 | gnomAD-4.0.0 | 2.56347E-06 | None | None | None | None | N | None | 1.69239E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.3944E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.135 | likely_benign | 0.1348 | benign | -0.826 | Destabilizing | 0.472 | N | 0.285 | neutral | N | 0.506851591 | None | None | N |
V/C | 0.6842 | likely_pathogenic | 0.6399 | pathogenic | -0.71 | Destabilizing | 0.996 | D | 0.393 | neutral | None | None | None | None | N |
V/D | 0.2075 | likely_benign | 0.1931 | benign | -0.231 | Destabilizing | 0.59 | D | 0.366 | neutral | None | None | None | None | N |
V/E | 0.1423 | likely_benign | 0.1462 | benign | -0.254 | Destabilizing | 0.012 | N | 0.182 | neutral | N | 0.443954905 | None | None | N |
V/F | 0.1038 | likely_benign | 0.0964 | benign | -0.62 | Destabilizing | 0.91 | D | 0.389 | neutral | None | None | None | None | N |
V/G | 0.1774 | likely_benign | 0.1736 | benign | -1.07 | Destabilizing | 0.815 | D | 0.385 | neutral | N | 0.510123969 | None | None | N |
V/H | 0.3162 | likely_benign | 0.3024 | benign | -0.427 | Destabilizing | 0.953 | D | 0.399 | neutral | None | None | None | None | N |
V/I | 0.0686 | likely_benign | 0.068 | benign | -0.291 | Destabilizing | 0.309 | N | 0.347 | neutral | N | 0.506987664 | None | None | N |
V/K | 0.172 | likely_benign | 0.1661 | benign | -0.627 | Destabilizing | 0.59 | D | 0.343 | neutral | None | None | None | None | N |
V/L | 0.131 | likely_benign | 0.1272 | benign | -0.291 | Destabilizing | 0.007 | N | 0.136 | neutral | D | 0.525034707 | None | None | N |
V/M | 0.0976 | likely_benign | 0.0984 | benign | -0.417 | Destabilizing | 0.91 | D | 0.401 | neutral | None | None | None | None | N |
V/N | 0.1355 | likely_benign | 0.1336 | benign | -0.535 | Destabilizing | 0.953 | D | 0.395 | neutral | None | None | None | None | N |
V/P | 0.797 | likely_pathogenic | 0.7693 | pathogenic | -0.433 | Destabilizing | 0.984 | D | 0.391 | neutral | None | None | None | None | N |
V/Q | 0.1514 | likely_benign | 0.1516 | benign | -0.651 | Destabilizing | 0.101 | N | 0.234 | neutral | None | None | None | None | N |
V/R | 0.1601 | likely_benign | 0.152 | benign | -0.171 | Destabilizing | 0.91 | D | 0.399 | neutral | None | None | None | None | N |
V/S | 0.1357 | likely_benign | 0.1361 | benign | -1.032 | Destabilizing | 0.742 | D | 0.347 | neutral | None | None | None | None | N |
V/T | 0.1434 | likely_benign | 0.1422 | benign | -0.938 | Destabilizing | 0.742 | D | 0.262 | neutral | None | None | None | None | N |
V/W | 0.6851 | likely_pathogenic | 0.6543 | pathogenic | -0.761 | Destabilizing | 0.996 | D | 0.437 | neutral | None | None | None | None | N |
V/Y | 0.3588 | ambiguous | 0.3327 | benign | -0.454 | Destabilizing | 0.953 | D | 0.393 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.