Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7459 | 22600;22601;22602 | chr2:178722412;178722411;178722410 | chr2:179587139;179587138;179587137 |
N2AB | 7142 | 21649;21650;21651 | chr2:178722412;178722411;178722410 | chr2:179587139;179587138;179587137 |
N2A | 6215 | 18868;18869;18870 | chr2:178722412;178722411;178722410 | chr2:179587139;179587138;179587137 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.996 | D | 0.719 | 0.577 | 0.890862651804 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7437 | likely_pathogenic | 0.7136 | pathogenic | -1.864 | Destabilizing | 0.978 | D | 0.499 | neutral | None | None | None | None | N |
L/C | 0.8448 | likely_pathogenic | 0.8154 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
L/D | 0.9863 | likely_pathogenic | 0.9835 | pathogenic | -1.933 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
L/E | 0.8716 | likely_pathogenic | 0.8539 | pathogenic | -1.706 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
L/F | 0.3843 | ambiguous | 0.3711 | ambiguous | -1.113 | Destabilizing | 0.989 | D | 0.583 | neutral | D | 0.527116577 | None | None | N |
L/G | 0.9447 | likely_pathogenic | 0.9369 | pathogenic | -2.353 | Highly Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
L/H | 0.7454 | likely_pathogenic | 0.735 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/I | 0.1105 | likely_benign | 0.1067 | benign | -0.465 | Destabilizing | 0.026 | N | 0.4 | neutral | N | 0.45452419 | None | None | N |
L/K | 0.8312 | likely_pathogenic | 0.818 | pathogenic | -1.247 | Destabilizing | 0.948 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/M | 0.2431 | likely_benign | 0.2295 | benign | -0.369 | Destabilizing | 0.987 | D | 0.62 | neutral | None | None | None | None | N |
L/N | 0.9333 | likely_pathogenic | 0.9236 | pathogenic | -1.67 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
L/P | 0.9356 | likely_pathogenic | 0.9258 | pathogenic | -0.912 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
L/Q | 0.5484 | ambiguous | 0.5435 | ambiguous | -1.5 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
L/R | 0.6907 | likely_pathogenic | 0.6884 | pathogenic | -1.107 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
L/S | 0.8705 | likely_pathogenic | 0.8523 | pathogenic | -2.313 | Highly Destabilizing | 0.996 | D | 0.719 | prob.delet. | D | 0.559299389 | None | None | N |
L/T | 0.7656 | likely_pathogenic | 0.7292 | pathogenic | -1.936 | Destabilizing | 0.989 | D | 0.641 | neutral | None | None | None | None | N |
L/V | 0.1347 | likely_benign | 0.1314 | benign | -0.912 | Destabilizing | 0.008 | N | 0.266 | neutral | N | 0.502240779 | None | None | N |
L/W | 0.6829 | likely_pathogenic | 0.6676 | pathogenic | -1.425 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/Y | 0.7957 | likely_pathogenic | 0.7858 | pathogenic | -1.059 | Destabilizing | 0.967 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.