Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7460 | 22603;22604;22605 | chr2:178722409;178722408;178722407 | chr2:179587136;179587135;179587134 |
N2AB | 7143 | 21652;21653;21654 | chr2:178722409;178722408;178722407 | chr2:179587136;179587135;179587134 |
N2A | 6216 | 18871;18872;18873 | chr2:178722409;178722408;178722407 | chr2:179587136;179587135;179587134 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.863 | N | 0.37 | 0.261 | 0.612832922585 | gnomAD-4.0.0 | 1.59202E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2322 | likely_benign | 0.2144 | benign | 0.133 | Stabilizing | 0.329 | N | 0.32 | neutral | None | None | None | None | N |
R/C | 0.2381 | likely_benign | 0.2049 | benign | -0.161 | Destabilizing | 0.995 | D | 0.342 | neutral | None | None | None | None | N |
R/D | 0.4333 | ambiguous | 0.3955 | ambiguous | -0.294 | Destabilizing | 0.704 | D | 0.376 | neutral | None | None | None | None | N |
R/E | 0.2091 | likely_benign | 0.1935 | benign | -0.246 | Destabilizing | 0.329 | N | 0.295 | neutral | None | None | None | None | N |
R/F | 0.4588 | ambiguous | 0.4179 | ambiguous | -0.172 | Destabilizing | 0.944 | D | 0.357 | neutral | None | None | None | None | N |
R/G | 0.1519 | likely_benign | 0.1463 | benign | -0.015 | Destabilizing | 0.27 | N | 0.361 | neutral | N | 0.481342645 | None | None | N |
R/H | 0.09 | likely_benign | 0.0886 | benign | -0.582 | Destabilizing | 0.981 | D | 0.323 | neutral | None | None | None | None | N |
R/I | 0.2283 | likely_benign | 0.216 | benign | 0.48 | Stabilizing | 0.863 | D | 0.37 | neutral | N | 0.483940233 | None | None | N |
R/K | 0.0845 | likely_benign | 0.0844 | benign | -0.065 | Destabilizing | 0.002 | N | 0.183 | neutral | N | 0.403225791 | None | None | N |
R/L | 0.1796 | likely_benign | 0.1637 | benign | 0.48 | Stabilizing | 0.329 | N | 0.362 | neutral | None | None | None | None | N |
R/M | 0.2086 | likely_benign | 0.196 | benign | -0.035 | Destabilizing | 0.981 | D | 0.339 | neutral | None | None | None | None | N |
R/N | 0.3563 | ambiguous | 0.3302 | benign | 0.002 | Stabilizing | 0.704 | D | 0.262 | neutral | None | None | None | None | N |
R/P | 0.3186 | likely_benign | 0.2954 | benign | 0.383 | Stabilizing | 0.828 | D | 0.365 | neutral | None | None | None | None | N |
R/Q | 0.0854 | likely_benign | 0.0846 | benign | -0.011 | Destabilizing | 0.704 | D | 0.321 | neutral | None | None | None | None | N |
R/S | 0.2612 | likely_benign | 0.2502 | benign | -0.136 | Destabilizing | 0.023 | N | 0.207 | neutral | N | 0.450518305 | None | None | N |
R/T | 0.1317 | likely_benign | 0.1284 | benign | 0.022 | Stabilizing | 0.01 | N | 0.179 | neutral | N | 0.418715318 | None | None | N |
R/V | 0.2671 | likely_benign | 0.2522 | benign | 0.383 | Stabilizing | 0.543 | D | 0.388 | neutral | None | None | None | None | N |
R/W | 0.1473 | likely_benign | 0.1338 | benign | -0.377 | Destabilizing | 0.995 | D | 0.361 | neutral | None | None | None | None | N |
R/Y | 0.3161 | likely_benign | 0.2834 | benign | 0.039 | Stabilizing | 0.981 | D | 0.358 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.