Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7463 | 22612;22613;22614 | chr2:178722400;178722399;178722398 | chr2:179587127;179587126;179587125 |
N2AB | 7146 | 21661;21662;21663 | chr2:178722400;178722399;178722398 | chr2:179587127;179587126;179587125 |
N2A | 6219 | 18880;18881;18882 | chr2:178722400;178722399;178722398 | chr2:179587127;179587126;179587125 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.101 | N | 0.255 | 0.196 | 0.448498829774 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0914 | likely_benign | 0.104 | benign | -0.003 | Destabilizing | 0.101 | N | 0.227 | neutral | N | 0.452740252 | None | None | N |
E/C | 0.5836 | likely_pathogenic | 0.6439 | pathogenic | -0.081 | Destabilizing | 0.983 | D | 0.283 | neutral | None | None | None | None | N |
E/D | 0.0709 | likely_benign | 0.0849 | benign | -0.227 | Destabilizing | 0.002 | N | 0.138 | neutral | N | 0.447043644 | None | None | N |
E/F | 0.4798 | ambiguous | 0.5484 | ambiguous | -0.097 | Destabilizing | 0.002 | N | 0.175 | neutral | None | None | None | None | N |
E/G | 0.0779 | likely_benign | 0.0859 | benign | -0.106 | Destabilizing | 0.101 | N | 0.255 | neutral | N | 0.445774207 | None | None | N |
E/H | 0.1978 | likely_benign | 0.2479 | benign | 0.468 | Stabilizing | 0.005 | N | 0.106 | neutral | None | None | None | None | N |
E/I | 0.2237 | likely_benign | 0.258 | benign | 0.21 | Stabilizing | 0.264 | N | 0.361 | neutral | None | None | None | None | N |
E/K | 0.0758 | likely_benign | 0.0763 | benign | 0.456 | Stabilizing | 0.183 | N | 0.173 | neutral | N | 0.480676215 | None | None | N |
E/L | 0.2489 | likely_benign | 0.2882 | benign | 0.21 | Stabilizing | 0.002 | N | 0.223 | neutral | None | None | None | None | N |
E/M | 0.3055 | likely_benign | 0.3383 | benign | 0.048 | Stabilizing | 0.716 | D | 0.293 | neutral | None | None | None | None | N |
E/N | 0.1072 | likely_benign | 0.1296 | benign | 0.297 | Stabilizing | 0.002 | N | 0.144 | neutral | None | None | None | None | N |
E/P | 0.2398 | likely_benign | 0.2631 | benign | 0.157 | Stabilizing | 0.002 | N | 0.169 | neutral | None | None | None | None | N |
E/Q | 0.0887 | likely_benign | 0.0993 | benign | 0.296 | Stabilizing | 0.351 | N | 0.249 | neutral | N | 0.473115524 | None | None | N |
E/R | 0.1144 | likely_benign | 0.1214 | benign | 0.638 | Stabilizing | 0.418 | N | 0.225 | neutral | None | None | None | None | N |
E/S | 0.0883 | likely_benign | 0.1112 | benign | 0.136 | Stabilizing | 0.027 | N | 0.165 | neutral | None | None | None | None | N |
E/T | 0.1272 | likely_benign | 0.1448 | benign | 0.227 | Stabilizing | 0.129 | N | 0.278 | neutral | None | None | None | None | N |
E/V | 0.1495 | likely_benign | 0.1676 | benign | 0.157 | Stabilizing | 0.007 | N | 0.158 | neutral | N | 0.510519119 | None | None | N |
E/W | 0.6269 | likely_pathogenic | 0.6762 | pathogenic | -0.071 | Destabilizing | 0.983 | D | 0.283 | neutral | None | None | None | None | N |
E/Y | 0.3157 | likely_benign | 0.3789 | ambiguous | 0.123 | Stabilizing | 0.264 | N | 0.42 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.