Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7464 | 22615;22616;22617 | chr2:178722397;178722396;178722395 | chr2:179587124;179587123;179587122 |
N2AB | 7147 | 21664;21665;21666 | chr2:178722397;178722396;178722395 | chr2:179587124;179587123;179587122 |
N2A | 6220 | 18883;18884;18885 | chr2:178722397;178722396;178722395 | chr2:179587124;179587123;179587122 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs879082137 | None | 0.805 | N | 0.437 | 0.161 | 0.233785782151 | gnomAD-4.0.0 | 1.36869E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4709 | ambiguous | 0.3374 | benign | -0.623 | Destabilizing | 0.64 | D | 0.469 | neutral | None | None | None | None | N |
N/C | 0.5719 | likely_pathogenic | 0.4333 | ambiguous | 0.231 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/D | 0.2652 | likely_benign | 0.1984 | benign | -0.408 | Destabilizing | 0.805 | D | 0.437 | neutral | N | 0.473413808 | None | None | N |
N/E | 0.5998 | likely_pathogenic | 0.4691 | ambiguous | -0.328 | Destabilizing | 0.329 | N | 0.255 | neutral | None | None | None | None | N |
N/F | 0.5947 | likely_pathogenic | 0.4812 | ambiguous | -0.38 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
N/G | 0.4811 | ambiguous | 0.3988 | ambiguous | -0.959 | Destabilizing | 0.95 | D | 0.413 | neutral | None | None | None | None | N |
N/H | 0.1605 | likely_benign | 0.1233 | benign | -0.88 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.498021464 | None | None | N |
N/I | 0.3235 | likely_benign | 0.2337 | benign | 0.224 | Stabilizing | 0.996 | D | 0.624 | neutral | N | 0.486124083 | None | None | N |
N/K | 0.4078 | ambiguous | 0.2888 | benign | -0.363 | Destabilizing | 0.99 | D | 0.399 | neutral | N | 0.435124778 | None | None | N |
N/L | 0.3767 | ambiguous | 0.2988 | benign | 0.224 | Stabilizing | 0.994 | D | 0.563 | neutral | None | None | None | None | N |
N/M | 0.4342 | ambiguous | 0.3539 | ambiguous | 0.627 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
N/P | 0.8588 | likely_pathogenic | 0.7822 | pathogenic | -0.027 | Destabilizing | 0.987 | D | 0.561 | neutral | None | None | None | None | N |
N/Q | 0.4643 | ambiguous | 0.3595 | ambiguous | -0.758 | Destabilizing | 0.994 | D | 0.437 | neutral | None | None | None | None | N |
N/R | 0.4596 | ambiguous | 0.3357 | benign | -0.493 | Destabilizing | 0.998 | D | 0.435 | neutral | None | None | None | None | N |
N/S | 0.1928 | likely_benign | 0.1558 | benign | -0.773 | Destabilizing | 0.101 | N | 0.143 | neutral | N | 0.490767417 | None | None | N |
N/T | 0.2535 | likely_benign | 0.1833 | benign | -0.514 | Destabilizing | 0.865 | D | 0.401 | neutral | N | 0.521186325 | None | None | N |
N/V | 0.3877 | ambiguous | 0.2815 | benign | -0.027 | Destabilizing | 0.938 | D | 0.583 | neutral | None | None | None | None | N |
N/W | 0.8436 | likely_pathogenic | 0.7558 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/Y | 0.1711 | likely_benign | 0.132 | benign | -0.036 | Destabilizing | 1.0 | D | 0.59 | neutral | N | 0.484731732 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.