Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7467 | 22624;22625;22626 | chr2:178722388;178722387;178722386 | chr2:179587115;179587114;179587113 |
N2AB | 7150 | 21673;21674;21675 | chr2:178722388;178722387;178722386 | chr2:179587115;179587114;179587113 |
N2A | 6223 | 18892;18893;18894 | chr2:178722388;178722387;178722386 | chr2:179587115;179587114;179587113 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs967100948 | None | None | N | 0.203 | 0.072 | 0.19670166235 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs967100948 | None | None | N | 0.203 | 0.072 | 0.19670166235 | gnomAD-4.0.0 | 1.31524E-05 | None | None | None | None | I | None | 4.82859E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1044 | likely_benign | 0.1156 | benign | -1.131 | Destabilizing | None | N | 0.095 | neutral | N | 0.479801062 | None | None | I |
T/C | 0.5096 | ambiguous | 0.5011 | ambiguous | -0.618 | Destabilizing | 0.5 | N | 0.546 | neutral | None | None | None | None | I |
T/D | 0.583 | likely_pathogenic | 0.6213 | pathogenic | -0.415 | Destabilizing | 0.076 | N | 0.579 | neutral | None | None | None | None | I |
T/E | 0.4116 | ambiguous | 0.4297 | ambiguous | -0.35 | Destabilizing | 0.119 | N | 0.495 | neutral | None | None | None | None | I |
T/F | 0.2857 | likely_benign | 0.2736 | benign | -1.113 | Destabilizing | 0.335 | N | 0.59 | neutral | None | None | None | None | I |
T/G | 0.3085 | likely_benign | 0.3527 | ambiguous | -1.454 | Destabilizing | 0.065 | N | 0.491 | neutral | None | None | None | None | I |
T/H | 0.3128 | likely_benign | 0.3178 | benign | -1.698 | Destabilizing | 0.803 | D | 0.574 | neutral | None | None | None | None | I |
T/I | 0.2109 | likely_benign | 0.2161 | benign | -0.337 | Destabilizing | None | N | 0.203 | neutral | N | 0.399894697 | None | None | I |
T/K | 0.2542 | likely_benign | 0.2527 | benign | -0.693 | Destabilizing | 0.159 | N | 0.473 | neutral | None | None | None | None | I |
T/L | 0.1108 | likely_benign | 0.0934 | benign | -0.337 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | I |
T/M | 0.0818 | likely_benign | 0.0659 | benign | -0.05 | Destabilizing | 0.001 | N | 0.237 | neutral | None | None | None | None | I |
T/N | 0.1792 | likely_benign | 0.1955 | benign | -0.846 | Destabilizing | 0.058 | N | 0.475 | neutral | N | 0.490087329 | None | None | I |
T/P | 0.2745 | likely_benign | 0.3311 | benign | -0.569 | Destabilizing | 0.058 | N | 0.587 | neutral | N | 0.496541384 | None | None | I |
T/Q | 0.2603 | likely_benign | 0.2567 | benign | -0.876 | Destabilizing | 0.236 | N | 0.607 | neutral | None | None | None | None | I |
T/R | 0.2026 | likely_benign | 0.2015 | benign | -0.618 | Destabilizing | 0.335 | N | 0.577 | neutral | None | None | None | None | I |
T/S | 0.1233 | likely_benign | 0.1477 | benign | -1.166 | Destabilizing | 0.002 | N | 0.319 | neutral | N | 0.514876428 | None | None | I |
T/V | 0.1722 | likely_benign | 0.1656 | benign | -0.569 | Destabilizing | 0.005 | N | 0.253 | neutral | None | None | None | None | I |
T/W | 0.6006 | likely_pathogenic | 0.5898 | pathogenic | -1.061 | Destabilizing | 0.976 | D | 0.575 | neutral | None | None | None | None | I |
T/Y | 0.3012 | likely_benign | 0.3067 | benign | -0.804 | Destabilizing | 0.782 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.