Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7470 | 22633;22634;22635 | chr2:178722379;178722378;178722377 | chr2:179587106;179587105;179587104 |
N2AB | 7153 | 21682;21683;21684 | chr2:178722379;178722378;178722377 | chr2:179587106;179587105;179587104 |
N2A | 6226 | 18901;18902;18903 | chr2:178722379;178722378;178722377 | chr2:179587106;179587105;179587104 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1429215263 | -0.381 | 0.425 | N | 0.219 | 0.14 | 0.568500581595 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
V/A | rs1429215263 | -0.381 | 0.425 | N | 0.219 | 0.14 | 0.568500581595 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52118E-05 | None | 0 | 0 | 8.99619E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1285 | likely_benign | 0.1778 | benign | -0.507 | Destabilizing | 0.425 | N | 0.219 | neutral | N | 0.487785827 | None | None | I |
V/C | 0.7646 | likely_pathogenic | 0.8371 | pathogenic | -0.717 | Destabilizing | 0.995 | D | 0.305 | neutral | None | None | None | None | I |
V/D | 0.2269 | likely_benign | 0.3284 | benign | -0.034 | Destabilizing | 0.003 | N | 0.197 | neutral | None | None | None | None | I |
V/E | 0.1875 | likely_benign | 0.2515 | benign | -0.127 | Destabilizing | 0.27 | N | 0.283 | neutral | N | 0.437220934 | None | None | I |
V/F | 0.1423 | likely_benign | 0.1742 | benign | -0.601 | Destabilizing | 0.893 | D | 0.322 | neutral | None | None | None | None | I |
V/G | 0.1998 | likely_benign | 0.2655 | benign | -0.651 | Destabilizing | 0.642 | D | 0.353 | neutral | N | 0.492154284 | None | None | I |
V/H | 0.3843 | ambiguous | 0.5164 | ambiguous | -0.11 | Destabilizing | 0.981 | D | 0.359 | neutral | None | None | None | None | I |
V/I | 0.0697 | likely_benign | 0.0773 | benign | -0.272 | Destabilizing | 0.006 | N | 0.157 | neutral | N | 0.449768944 | None | None | I |
V/K | 0.271 | likely_benign | 0.362 | ambiguous | -0.409 | Destabilizing | 0.031 | N | 0.211 | neutral | None | None | None | None | I |
V/L | 0.1309 | likely_benign | 0.1632 | benign | -0.272 | Destabilizing | 0.27 | N | 0.243 | neutral | N | 0.465314399 | None | None | I |
V/M | 0.1179 | likely_benign | 0.1452 | benign | -0.424 | Destabilizing | 0.893 | D | 0.281 | neutral | None | None | None | None | I |
V/N | 0.2066 | likely_benign | 0.3247 | benign | -0.234 | Destabilizing | 0.704 | D | 0.372 | neutral | None | None | None | None | I |
V/P | 0.715 | likely_pathogenic | 0.7946 | pathogenic | -0.315 | Destabilizing | 0.981 | D | 0.405 | neutral | None | None | None | None | I |
V/Q | 0.2217 | likely_benign | 0.2945 | benign | -0.424 | Destabilizing | 0.893 | D | 0.403 | neutral | None | None | None | None | I |
V/R | 0.219 | likely_benign | 0.2842 | benign | 0.074 | Stabilizing | 0.007 | N | 0.259 | neutral | None | None | None | None | I |
V/S | 0.1457 | likely_benign | 0.2123 | benign | -0.653 | Destabilizing | 0.704 | D | 0.323 | neutral | None | None | None | None | I |
V/T | 0.1194 | likely_benign | 0.1664 | benign | -0.638 | Destabilizing | 0.704 | D | 0.154 | neutral | None | None | None | None | I |
V/W | 0.6703 | likely_pathogenic | 0.7344 | pathogenic | -0.674 | Destabilizing | 0.995 | D | 0.417 | neutral | None | None | None | None | I |
V/Y | 0.4568 | ambiguous | 0.5634 | ambiguous | -0.388 | Destabilizing | 0.981 | D | 0.317 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.