Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7480 | 22663;22664;22665 | chr2:178722349;178722348;178722347 | chr2:179587076;179587075;179587074 |
N2AB | 7163 | 21712;21713;21714 | chr2:178722349;178722348;178722347 | chr2:179587076;179587075;179587074 |
N2A | 6236 | 18931;18932;18933 | chr2:178722349;178722348;178722347 | chr2:179587076;179587075;179587074 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs201065037 | 0.127 | 0.73 | N | 0.367 | 0.394 | None | gnomAD-2.1.1 | 1.47131E-04 | None | None | None | None | N | None | 8.29E-05 | 0 | None | 9.7E-05 | 0 | None | 0 | None | 0 | 2.99288E-04 | 0 |
Q/P | rs201065037 | 0.127 | 0.73 | N | 0.367 | 0.394 | None | gnomAD-3.1.2 | 1.7092E-04 | None | None | None | None | N | None | 1.20662E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 3.08814E-04 | 0 | 0 |
Q/P | rs201065037 | 0.127 | 0.73 | N | 0.367 | 0.394 | None | gnomAD-4.0.0 | 2.34935E-04 | None | None | None | None | N | None | 6.67682E-05 | 1.6685E-05 | None | 3.37975E-05 | 0 | None | 0 | 0 | 3.069E-04 | 0 | 1.60215E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2686 | likely_benign | 0.2396 | benign | -0.431 | Destabilizing | 0.032 | N | 0.11 | neutral | None | None | None | None | N |
Q/C | 0.6956 | likely_pathogenic | 0.6277 | pathogenic | 0.315 | Stabilizing | 0.993 | D | 0.317 | neutral | None | None | None | None | N |
Q/D | 0.3509 | ambiguous | 0.3103 | benign | -0.416 | Destabilizing | 0.268 | N | 0.21 | neutral | None | None | None | None | N |
Q/E | 0.0887 | likely_benign | 0.0803 | benign | -0.388 | Destabilizing | 0.002 | N | 0.125 | neutral | N | 0.456220488 | None | None | N |
Q/F | 0.6899 | likely_pathogenic | 0.6428 | pathogenic | -0.338 | Destabilizing | 0.986 | D | 0.354 | neutral | None | None | None | None | N |
Q/G | 0.2822 | likely_benign | 0.2478 | benign | -0.724 | Destabilizing | 0.008 | N | 0.118 | neutral | None | None | None | None | N |
Q/H | 0.175 | likely_benign | 0.1665 | benign | -0.715 | Destabilizing | 0.926 | D | 0.211 | neutral | N | 0.515711508 | None | None | N |
Q/I | 0.5188 | ambiguous | 0.4559 | ambiguous | 0.289 | Stabilizing | 0.701 | D | 0.409 | neutral | None | None | None | None | N |
Q/K | 0.0809 | likely_benign | 0.0758 | benign | -0.256 | Destabilizing | 0.01 | N | 0.109 | neutral | N | 0.452641465 | None | None | N |
Q/L | 0.1744 | likely_benign | 0.1617 | benign | 0.289 | Stabilizing | 0.422 | N | 0.333 | neutral | D | 0.530776961 | None | None | N |
Q/M | 0.4379 | ambiguous | 0.405 | ambiguous | 0.811 | Stabilizing | 0.981 | D | 0.231 | neutral | None | None | None | None | N |
Q/N | 0.2853 | likely_benign | 0.2453 | benign | -0.556 | Destabilizing | 0.023 | N | 0.111 | neutral | None | None | None | None | N |
Q/P | 0.4233 | ambiguous | 0.3752 | ambiguous | 0.08 | Stabilizing | 0.73 | D | 0.367 | neutral | N | 0.502627568 | None | None | N |
Q/R | 0.0849 | likely_benign | 0.0832 | benign | -0.122 | Destabilizing | 0.002 | N | 0.093 | neutral | N | 0.460703587 | None | None | N |
Q/S | 0.2847 | likely_benign | 0.2518 | benign | -0.594 | Destabilizing | 0.347 | N | 0.185 | neutral | None | None | None | None | N |
Q/T | 0.2476 | likely_benign | 0.2105 | benign | -0.397 | Destabilizing | 0.001 | N | 0.133 | neutral | None | None | None | None | N |
Q/V | 0.3501 | ambiguous | 0.3101 | benign | 0.08 | Stabilizing | 0.225 | N | 0.352 | neutral | None | None | None | None | N |
Q/W | 0.4963 | ambiguous | 0.4406 | ambiguous | -0.28 | Destabilizing | 0.999 | D | 0.32 | neutral | None | None | None | None | N |
Q/Y | 0.4326 | ambiguous | 0.3819 | ambiguous | -0.067 | Destabilizing | 0.986 | D | 0.329 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.