Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7484 | 22675;22676;22677 | chr2:178722337;178722336;178722335 | chr2:179587064;179587063;179587062 |
N2AB | 7167 | 21724;21725;21726 | chr2:178722337;178722336;178722335 | chr2:179587064;179587063;179587062 |
N2A | 6240 | 18943;18944;18945 | chr2:178722337;178722336;178722335 | chr2:179587064;179587063;179587062 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.965 | N | 0.361 | 0.548 | 0.726310685241 | gnomAD-4.0.0 | 1.59273E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86074E-06 | 0 | 0 |
S/R | None | None | 0.024 | N | 0.182 | 0.168 | 0.235664433957 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86066E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0942 | likely_benign | 0.0921 | benign | -0.234 | Destabilizing | None | N | 0.075 | neutral | None | None | None | None | I |
S/C | 0.1641 | likely_benign | 0.1695 | benign | -0.172 | Destabilizing | 0.994 | D | 0.336 | neutral | D | 0.543758665 | None | None | I |
S/D | 0.2321 | likely_benign | 0.2273 | benign | 0.072 | Stabilizing | 0.583 | D | 0.199 | neutral | None | None | None | None | I |
S/E | 0.3267 | likely_benign | 0.3059 | benign | -0.038 | Destabilizing | 0.796 | D | 0.191 | neutral | None | None | None | None | I |
S/F | 0.1887 | likely_benign | 0.18 | benign | -0.936 | Destabilizing | 0.996 | D | 0.354 | neutral | None | None | None | None | I |
S/G | 0.0784 | likely_benign | 0.0842 | benign | -0.301 | Destabilizing | 0.447 | N | 0.283 | neutral | N | 0.519207599 | None | None | I |
S/H | 0.1795 | likely_benign | 0.1846 | benign | -0.717 | Destabilizing | 0.973 | D | 0.344 | neutral | None | None | None | None | I |
S/I | 0.1315 | likely_benign | 0.1304 | benign | -0.19 | Destabilizing | 0.965 | D | 0.361 | neutral | N | 0.507296666 | None | None | I |
S/K | 0.3176 | likely_benign | 0.3073 | benign | -0.364 | Destabilizing | 0.683 | D | 0.197 | neutral | None | None | None | None | I |
S/L | 0.1164 | likely_benign | 0.112 | benign | -0.19 | Destabilizing | 0.913 | D | 0.313 | neutral | None | None | None | None | I |
S/M | 0.2075 | likely_benign | 0.2098 | benign | 0.002 | Stabilizing | 0.996 | D | 0.341 | neutral | None | None | None | None | I |
S/N | 0.0915 | likely_benign | 0.0966 | benign | -0.027 | Destabilizing | None | N | 0.092 | neutral | N | 0.487671474 | None | None | I |
S/P | 0.3048 | likely_benign | 0.2853 | benign | -0.179 | Destabilizing | 0.952 | D | 0.355 | neutral | None | None | None | None | I |
S/Q | 0.2638 | likely_benign | 0.2597 | benign | -0.291 | Destabilizing | 0.973 | D | 0.295 | neutral | None | None | None | None | I |
S/R | 0.2259 | likely_benign | 0.2166 | benign | -0.11 | Destabilizing | 0.024 | N | 0.182 | neutral | N | 0.513473706 | None | None | I |
S/T | 0.0853 | likely_benign | 0.0824 | benign | -0.15 | Destabilizing | 0.092 | N | 0.241 | neutral | N | 0.513455063 | None | None | I |
S/V | 0.1778 | likely_benign | 0.1743 | benign | -0.179 | Destabilizing | 0.662 | D | 0.313 | neutral | None | None | None | None | I |
S/W | 0.2611 | likely_benign | 0.2463 | benign | -0.993 | Destabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | I |
S/Y | 0.179 | likely_benign | 0.1766 | benign | -0.69 | Destabilizing | 0.996 | D | 0.353 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.