Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7488 | 22687;22688;22689 | chr2:178722325;178722324;178722323 | chr2:179587052;179587051;179587050 |
N2AB | 7171 | 21736;21737;21738 | chr2:178722325;178722324;178722323 | chr2:179587052;179587051;179587050 |
N2A | 6244 | 18955;18956;18957 | chr2:178722325;178722324;178722323 | chr2:179587052;179587051;179587050 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | rs959952502 | None | 0.647 | N | 0.449 | 0.303 | None | gnomAD-4.0.0 | 6.16171E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.45092E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2875 | likely_benign | 0.2777 | benign | -0.6 | Destabilizing | 0.143 | N | 0.248 | neutral | None | None | None | None | N |
Q/C | 0.7659 | likely_pathogenic | 0.7317 | pathogenic | -0.008 | Destabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
Q/D | 0.4465 | ambiguous | 0.4173 | ambiguous | -0.558 | Destabilizing | 0.647 | D | 0.413 | neutral | None | None | None | None | N |
Q/E | 0.1013 | likely_benign | 0.0944 | benign | -0.526 | Destabilizing | 0.017 | N | 0.182 | neutral | N | 0.439858595 | None | None | N |
Q/F | 0.5995 | likely_pathogenic | 0.5853 | pathogenic | -0.661 | Destabilizing | 0.992 | D | 0.585 | neutral | None | None | None | None | N |
Q/G | 0.4101 | ambiguous | 0.4003 | ambiguous | -0.868 | Destabilizing | 0.924 | D | 0.475 | neutral | None | None | None | None | N |
Q/H | 0.2157 | likely_benign | 0.2206 | benign | -0.917 | Destabilizing | 0.995 | D | 0.523 | neutral | N | 0.50631566 | None | None | N |
Q/I | 0.2749 | likely_benign | 0.2626 | benign | 0.046 | Stabilizing | 0.855 | D | 0.529 | neutral | None | None | None | None | N |
Q/K | 0.1151 | likely_benign | 0.1109 | benign | -0.114 | Destabilizing | 0.785 | D | 0.449 | neutral | N | 0.493402291 | None | None | N |
Q/L | 0.125 | likely_benign | 0.1227 | benign | 0.046 | Stabilizing | 0.647 | D | 0.449 | neutral | N | 0.487652541 | None | None | N |
Q/M | 0.3492 | ambiguous | 0.3424 | ambiguous | 0.622 | Stabilizing | 0.988 | D | 0.527 | neutral | None | None | None | None | N |
Q/N | 0.2946 | likely_benign | 0.2726 | benign | -0.571 | Destabilizing | 0.947 | D | 0.411 | neutral | None | None | None | None | N |
Q/P | 0.2103 | likely_benign | 0.2217 | benign | -0.14 | Destabilizing | 0.931 | D | 0.537 | neutral | N | 0.486275441 | None | None | N |
Q/R | 0.1226 | likely_benign | 0.1222 | benign | 0.01 | Stabilizing | 0.853 | D | 0.38 | neutral | N | 0.468103989 | None | None | N |
Q/S | 0.3016 | likely_benign | 0.2873 | benign | -0.647 | Destabilizing | 0.859 | D | 0.431 | neutral | None | None | None | None | N |
Q/T | 0.2207 | likely_benign | 0.208 | benign | -0.439 | Destabilizing | 0.321 | N | 0.461 | neutral | None | None | None | None | N |
Q/V | 0.2234 | likely_benign | 0.2122 | benign | -0.14 | Destabilizing | 0.045 | N | 0.339 | neutral | None | None | None | None | N |
Q/W | 0.5024 | ambiguous | 0.4993 | ambiguous | -0.527 | Destabilizing | 1.0 | D | 0.588 | neutral | None | None | None | None | N |
Q/Y | 0.4345 | ambiguous | 0.4267 | ambiguous | -0.273 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.