Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7497 | 22714;22715;22716 | chr2:178722298;178722297;178722296 | chr2:179587025;179587024;179587023 |
N2AB | 7180 | 21763;21764;21765 | chr2:178722298;178722297;178722296 | chr2:179587025;179587024;179587023 |
N2A | 6253 | 18982;18983;18984 | chr2:178722298;178722297;178722296 | chr2:179587025;179587024;179587023 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.933 | N | 0.404 | 0.233 | 0.416075642716 | gnomAD-4.0.0 | 1.60301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45319E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.162 | likely_benign | 0.1801 | benign | -0.442 | Destabilizing | 0.024 | N | 0.309 | neutral | None | None | None | None | I |
L/C | 0.5171 | ambiguous | 0.5437 | ambiguous | -0.744 | Destabilizing | 0.997 | D | 0.528 | neutral | None | None | None | None | I |
L/D | 0.6344 | likely_pathogenic | 0.6335 | pathogenic | -0.313 | Destabilizing | 0.99 | D | 0.58 | neutral | None | None | None | None | I |
L/E | 0.352 | ambiguous | 0.3462 | ambiguous | -0.412 | Destabilizing | 0.952 | D | 0.544 | neutral | None | None | None | None | I |
L/F | 0.1115 | likely_benign | 0.1177 | benign | -0.658 | Destabilizing | 0.933 | D | 0.404 | neutral | N | 0.496194667 | None | None | I |
L/G | 0.4713 | ambiguous | 0.5013 | ambiguous | -0.53 | Destabilizing | 0.93 | D | 0.566 | neutral | None | None | None | None | I |
L/H | 0.2025 | likely_benign | 0.2125 | benign | 0.106 | Stabilizing | 0.997 | D | 0.579 | neutral | N | 0.49829361 | None | None | I |
L/I | 0.0794 | likely_benign | 0.0861 | benign | -0.333 | Destabilizing | 0.057 | N | 0.345 | neutral | N | 0.458388427 | None | None | I |
L/K | 0.281 | likely_benign | 0.2894 | benign | -0.32 | Destabilizing | 0.442 | N | 0.557 | neutral | None | None | None | None | I |
L/M | 0.1164 | likely_benign | 0.1239 | benign | -0.588 | Destabilizing | 0.918 | D | 0.425 | neutral | None | None | None | None | I |
L/N | 0.3731 | ambiguous | 0.3899 | ambiguous | -0.166 | Destabilizing | 0.997 | D | 0.582 | neutral | None | None | None | None | I |
L/P | 0.6787 | likely_pathogenic | 0.7018 | pathogenic | -0.343 | Destabilizing | 0.986 | D | 0.569 | neutral | N | 0.510548669 | None | None | I |
L/Q | 0.1434 | likely_benign | 0.1543 | benign | -0.363 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | I |
L/R | 0.1708 | likely_benign | 0.1841 | benign | 0.163 | Stabilizing | 0.966 | D | 0.591 | neutral | N | 0.489468673 | None | None | I |
L/S | 0.2048 | likely_benign | 0.2251 | benign | -0.529 | Destabilizing | 0.869 | D | 0.559 | neutral | None | None | None | None | I |
L/T | 0.208 | likely_benign | 0.2278 | benign | -0.531 | Destabilizing | 0.799 | D | 0.47 | neutral | None | None | None | None | I |
L/V | 0.0784 | likely_benign | 0.0873 | benign | -0.343 | Destabilizing | None | N | 0.202 | neutral | N | 0.426390652 | None | None | I |
L/W | 0.2107 | likely_benign | 0.22 | benign | -0.674 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
L/Y | 0.2981 | likely_benign | 0.3019 | benign | -0.437 | Destabilizing | 0.815 | D | 0.521 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.