Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7499 | 22720;22721;22722 | chr2:178722292;178722291;178722290 | chr2:179587019;179587018;179587017 |
N2AB | 7182 | 21769;21770;21771 | chr2:178722292;178722291;178722290 | chr2:179587019;179587018;179587017 |
N2A | 6255 | 18988;18989;18990 | chr2:178722292;178722291;178722290 | chr2:179587019;179587018;179587017 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2078525840 | None | 0.186 | N | 0.32 | 0.117 | 0.163833314356 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs2078525840 | None | 0.186 | N | 0.32 | 0.117 | 0.163833314356 | gnomAD-4.0.0 | 5.16597E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.64343E-06 | 0 | 0 |
T/I | None | None | 0.982 | N | 0.438 | 0.248 | 0.467923293426 | gnomAD-4.0.0 | 3.21709E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.77027E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0918 | likely_benign | 0.0924 | benign | -0.371 | Destabilizing | 0.186 | N | 0.32 | neutral | N | 0.494154439 | None | None | I |
T/C | 0.5559 | ambiguous | 0.5452 | ambiguous | -0.164 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
T/D | 0.375 | ambiguous | 0.3727 | ambiguous | 0.106 | Stabilizing | 0.819 | D | 0.391 | neutral | None | None | None | None | I |
T/E | 0.263 | likely_benign | 0.2563 | benign | 0.008 | Stabilizing | 0.883 | D | 0.391 | neutral | None | None | None | None | I |
T/F | 0.1838 | likely_benign | 0.1919 | benign | -1.004 | Destabilizing | 0.29 | N | 0.376 | neutral | None | None | None | None | I |
T/G | 0.2936 | likely_benign | 0.3154 | benign | -0.446 | Destabilizing | 0.974 | D | 0.493 | neutral | None | None | None | None | I |
T/H | 0.2389 | likely_benign | 0.2346 | benign | -0.813 | Destabilizing | 0.993 | D | 0.538 | neutral | None | None | None | None | I |
T/I | 0.1663 | likely_benign | 0.1666 | benign | -0.294 | Destabilizing | 0.982 | D | 0.438 | neutral | N | 0.484340111 | None | None | I |
T/K | 0.1783 | likely_benign | 0.1736 | benign | -0.229 | Destabilizing | 0.888 | D | 0.407 | neutral | N | 0.499288113 | None | None | I |
T/L | 0.1097 | likely_benign | 0.1166 | benign | -0.294 | Destabilizing | 0.813 | D | 0.391 | neutral | None | None | None | None | I |
T/M | 0.0844 | likely_benign | 0.0857 | benign | 0.007 | Stabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | I |
T/N | 0.1182 | likely_benign | 0.1194 | benign | 0.046 | Stabilizing | 0.819 | D | 0.4 | neutral | None | None | None | None | I |
T/P | 0.2845 | likely_benign | 0.3182 | benign | -0.295 | Destabilizing | 0.96 | D | 0.459 | neutral | N | 0.488036641 | None | None | I |
T/Q | 0.2033 | likely_benign | 0.202 | benign | -0.243 | Destabilizing | 0.471 | N | 0.255 | neutral | None | None | None | None | I |
T/R | 0.1473 | likely_benign | 0.1474 | benign | 0.019 | Stabilizing | 0.993 | D | 0.442 | neutral | N | 0.519820888 | None | None | I |
T/S | 0.0994 | likely_benign | 0.1042 | benign | -0.146 | Destabilizing | 0.018 | N | 0.12 | neutral | N | 0.416077658 | None | None | I |
T/V | 0.1358 | likely_benign | 0.1367 | benign | -0.295 | Destabilizing | 0.938 | D | 0.329 | neutral | None | None | None | None | I |
T/W | 0.5496 | ambiguous | 0.5567 | ambiguous | -1.008 | Destabilizing | 1.0 | D | 0.543 | neutral | None | None | None | None | I |
T/Y | 0.2634 | likely_benign | 0.2548 | benign | -0.714 | Destabilizing | 0.99 | D | 0.531 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.