Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7500 | 22723;22724;22725 | chr2:178722289;178722288;178722287 | chr2:179587016;179587015;179587014 |
N2AB | 7183 | 21772;21773;21774 | chr2:178722289;178722288;178722287 | chr2:179587016;179587015;179587014 |
N2A | 6256 | 18991;18992;18993 | chr2:178722289;178722288;178722287 | chr2:179587016;179587015;179587014 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1204148672 | None | 0.583 | N | 0.428 | 0.28 | 0.281381271821 | gnomAD-4.0.0 | 6.88547E-07 | None | None | None | None | I | None | 0 | 2.2718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs1560689342 | None | 0.999 | N | 0.539 | 0.341 | 0.591496729656 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1560689342 | None | 0.999 | N | 0.539 | 0.341 | 0.591496729656 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7505 | likely_pathogenic | 0.7489 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
A/D | 0.4032 | ambiguous | 0.4586 | ambiguous | 0.53 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
A/E | 0.5021 | ambiguous | 0.5532 | ambiguous | 0.429 | Stabilizing | 0.999 | D | 0.62 | neutral | N | 0.489353314 | None | None | I |
A/F | 0.5518 | ambiguous | 0.5479 | ambiguous | -0.728 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
A/G | 0.2683 | likely_benign | 0.2701 | benign | -0.453 | Destabilizing | 0.979 | D | 0.543 | neutral | N | 0.506865366 | None | None | I |
A/H | 0.7231 | likely_pathogenic | 0.7385 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
A/I | 0.3665 | ambiguous | 0.3802 | ambiguous | -0.186 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
A/K | 0.727 | likely_pathogenic | 0.7557 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
A/L | 0.4136 | ambiguous | 0.4191 | ambiguous | -0.186 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | I |
A/M | 0.4252 | ambiguous | 0.4373 | ambiguous | -0.356 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
A/N | 0.4768 | ambiguous | 0.5199 | ambiguous | -0.006 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | I |
A/P | 0.9666 | likely_pathogenic | 0.9633 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.511891795 | None | None | I |
A/Q | 0.5808 | likely_pathogenic | 0.6192 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
A/R | 0.6294 | likely_pathogenic | 0.6568 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
A/S | 0.1122 | likely_benign | 0.1188 | benign | -0.422 | Destabilizing | 0.583 | D | 0.428 | neutral | N | 0.509086606 | None | None | I |
A/T | 0.1142 | likely_benign | 0.1167 | benign | -0.411 | Destabilizing | 0.81 | D | 0.401 | neutral | N | 0.520015676 | None | None | I |
A/V | 0.1621 | likely_benign | 0.1742 | benign | -0.197 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.496560026 | None | None | I |
A/W | 0.9349 | likely_pathogenic | 0.9367 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
A/Y | 0.7367 | likely_pathogenic | 0.7421 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.