Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7503 | 22732;22733;22734 | chr2:178722280;178722279;178722278 | chr2:179587007;179587006;179587005 |
N2AB | 7186 | 21781;21782;21783 | chr2:178722280;178722279;178722278 | chr2:179587007;179587006;179587005 |
N2A | 6259 | 19000;19001;19002 | chr2:178722280;178722279;178722278 | chr2:179587007;179587006;179587005 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.001 | N | 0.269 | 0.185 | 0.297375071883 | gnomAD-4.0.0 | 3.45723E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.62171E-06 | 1.21021E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0902 | likely_benign | 0.0868 | benign | -0.616 | Destabilizing | 0.002 | N | 0.318 | neutral | None | None | None | None | N |
S/C | 0.2202 | likely_benign | 0.1605 | benign | -0.335 | Destabilizing | 0.835 | D | 0.546 | neutral | D | 0.52522311 | None | None | N |
S/D | 0.4566 | ambiguous | 0.4315 | ambiguous | -0.119 | Destabilizing | 0.049 | N | 0.379 | neutral | None | None | None | None | N |
S/E | 0.5251 | ambiguous | 0.502 | ambiguous | -0.21 | Destabilizing | 0.005 | N | 0.215 | neutral | None | None | None | None | N |
S/F | 0.1532 | likely_benign | 0.1482 | benign | -1.259 | Destabilizing | 0.869 | D | 0.607 | neutral | None | None | None | None | N |
S/G | 0.1226 | likely_benign | 0.1191 | benign | -0.718 | Destabilizing | 0.126 | N | 0.375 | neutral | N | 0.50832017 | None | None | N |
S/H | 0.2908 | likely_benign | 0.2802 | benign | -1.324 | Destabilizing | 0.869 | D | 0.564 | neutral | None | None | None | None | N |
S/I | 0.1463 | likely_benign | 0.1402 | benign | -0.468 | Destabilizing | 0.553 | D | 0.634 | neutral | N | 0.521500127 | None | None | N |
S/K | 0.5269 | ambiguous | 0.5299 | ambiguous | -0.455 | Destabilizing | 0.012 | N | 0.203 | neutral | None | None | None | None | N |
S/L | 0.1062 | likely_benign | 0.1023 | benign | -0.468 | Destabilizing | 0.318 | N | 0.546 | neutral | None | None | None | None | N |
S/M | 0.1864 | likely_benign | 0.1635 | benign | 0.015 | Stabilizing | 0.869 | D | 0.562 | neutral | None | None | None | None | N |
S/N | 0.1358 | likely_benign | 0.1223 | benign | -0.203 | Destabilizing | None | N | 0.234 | neutral | N | 0.496292301 | None | None | N |
S/P | 0.5886 | likely_pathogenic | 0.551 | ambiguous | -0.491 | Destabilizing | 0.336 | N | 0.564 | neutral | None | None | None | None | N |
S/Q | 0.4244 | ambiguous | 0.4141 | ambiguous | -0.558 | Destabilizing | 0.483 | N | 0.43 | neutral | None | None | None | None | N |
S/R | 0.4124 | ambiguous | 0.4276 | ambiguous | -0.233 | Destabilizing | 0.001 | N | 0.269 | neutral | N | 0.519687602 | None | None | N |
S/T | 0.0674 | likely_benign | 0.0606 | benign | -0.327 | Destabilizing | None | N | 0.205 | neutral | N | 0.497906821 | None | None | N |
S/V | 0.1545 | likely_benign | 0.1468 | benign | -0.491 | Destabilizing | 0.149 | N | 0.567 | neutral | None | None | None | None | N |
S/W | 0.3392 | likely_benign | 0.3329 | benign | -1.195 | Destabilizing | 0.987 | D | 0.652 | neutral | None | None | None | None | N |
S/Y | 0.1828 | likely_benign | 0.1659 | benign | -0.929 | Destabilizing | 0.869 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.