Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7508 | 22747;22748;22749 | chr2:178722265;178722264;178722263 | chr2:179586992;179586991;179586990 |
N2AB | 7191 | 21796;21797;21798 | chr2:178722265;178722264;178722263 | chr2:179586992;179586991;179586990 |
N2A | 6264 | 19015;19016;19017 | chr2:178722265;178722264;178722263 | chr2:179586992;179586991;179586990 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1241417806 | None | 0.055 | N | 0.233 | 0.19 | 0.230578612272 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
A/S | rs1241417806 | None | 0.055 | N | 0.233 | 0.19 | 0.230578612272 | gnomAD-4.0.0 | 2.68796E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.44439E-05 | None | 0 | 0 | 2.49415E-06 | 0 | 0 |
A/T | rs1241417806 | -0.625 | 0.012 | N | 0.206 | 0.2 | 0.233785782151 | gnomAD-2.1.1 | 4.56E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.87E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5523 | ambiguous | 0.5518 | ambiguous | -1.159 | Destabilizing | 0.356 | N | 0.359 | neutral | None | None | None | None | I |
A/D | 0.8106 | likely_pathogenic | 0.8595 | pathogenic | -1.47 | Destabilizing | 0.356 | N | 0.363 | neutral | None | None | None | None | I |
A/E | 0.7047 | likely_pathogenic | 0.7663 | pathogenic | -1.523 | Destabilizing | 0.106 | N | 0.332 | neutral | N | 0.456183202 | None | None | I |
A/F | 0.5061 | ambiguous | 0.5454 | ambiguous | -1.207 | Destabilizing | 0.214 | N | 0.357 | neutral | None | None | None | None | I |
A/G | 0.2365 | likely_benign | 0.2706 | benign | -1.178 | Destabilizing | 0.106 | N | 0.207 | neutral | N | 0.456183202 | None | None | I |
A/H | 0.862 | likely_pathogenic | 0.8905 | pathogenic | -1.209 | Destabilizing | 0.864 | D | 0.334 | neutral | None | None | None | None | I |
A/I | 0.1763 | likely_benign | 0.1834 | benign | -0.559 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | I |
A/K | 0.888 | likely_pathogenic | 0.9206 | pathogenic | -1.083 | Destabilizing | 0.136 | N | 0.335 | neutral | None | None | None | None | I |
A/L | 0.1412 | likely_benign | 0.1515 | benign | -0.559 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | I |
A/M | 0.2796 | likely_benign | 0.3056 | benign | -0.544 | Destabilizing | 0.214 | N | 0.375 | neutral | None | None | None | None | I |
A/N | 0.649 | likely_pathogenic | 0.696 | pathogenic | -0.872 | Destabilizing | 0.628 | D | 0.363 | neutral | None | None | None | None | I |
A/P | 0.3256 | likely_benign | 0.3687 | ambiguous | -0.658 | Destabilizing | 0.295 | N | 0.386 | neutral | N | 0.45635656 | None | None | I |
A/Q | 0.742 | likely_pathogenic | 0.798 | pathogenic | -1.125 | Destabilizing | 0.628 | D | 0.375 | neutral | None | None | None | None | I |
A/R | 0.8206 | likely_pathogenic | 0.8673 | pathogenic | -0.713 | Destabilizing | 0.356 | N | 0.385 | neutral | None | None | None | None | I |
A/S | 0.1587 | likely_benign | 0.1708 | benign | -1.192 | Destabilizing | 0.055 | N | 0.233 | neutral | N | 0.456183202 | None | None | I |
A/T | 0.1068 | likely_benign | 0.1088 | benign | -1.164 | Destabilizing | 0.012 | N | 0.206 | neutral | N | 0.437424083 | None | None | I |
A/V | 0.0887 | likely_benign | 0.0907 | benign | -0.658 | Destabilizing | None | N | 0.077 | neutral | N | 0.286355761 | None | None | I |
A/W | 0.8962 | likely_pathogenic | 0.9265 | pathogenic | -1.442 | Destabilizing | 0.864 | D | 0.377 | neutral | None | None | None | None | I |
A/Y | 0.7619 | likely_pathogenic | 0.8058 | pathogenic | -1.06 | Destabilizing | 0.356 | N | 0.382 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.