Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7516 | 22771;22772;22773 | chr2:178722117;178722116;178722115 | chr2:179586844;179586843;179586842 |
N2AB | 7199 | 21820;21821;21822 | chr2:178722117;178722116;178722115 | chr2:179586844;179586843;179586842 |
N2A | 6272 | 19039;19040;19041 | chr2:178722117;178722116;178722115 | chr2:179586844;179586843;179586842 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs2078474988 | None | 0.148 | N | 0.229 | 0.256 | 0.531922418639 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/S | rs2078474988 | None | 0.148 | N | 0.229 | 0.256 | 0.531922418639 | gnomAD-4.0.0 | 6.57194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47029E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.309 | likely_benign | 0.342 | ambiguous | -1.291 | Destabilizing | 0.347 | N | 0.201 | neutral | None | None | None | None | N |
F/C | 0.2831 | likely_benign | 0.3118 | benign | -0.367 | Destabilizing | 0.99 | D | 0.256 | neutral | N | 0.492711645 | None | None | N |
F/D | 0.6135 | likely_pathogenic | 0.6616 | pathogenic | 0.506 | Stabilizing | 0.855 | D | 0.329 | neutral | None | None | None | None | N |
F/E | 0.6249 | likely_pathogenic | 0.6638 | pathogenic | 0.507 | Stabilizing | 0.639 | D | 0.311 | neutral | None | None | None | None | N |
F/G | 0.6386 | likely_pathogenic | 0.6982 | pathogenic | -1.529 | Destabilizing | 0.709 | D | 0.277 | neutral | None | None | None | None | N |
F/H | 0.371 | ambiguous | 0.406 | ambiguous | 0.031 | Stabilizing | 0.975 | D | 0.252 | neutral | None | None | None | None | N |
F/I | 0.1018 | likely_benign | 0.1205 | benign | -0.651 | Destabilizing | 0.01 | N | 0.145 | neutral | N | 0.46587176 | None | None | N |
F/K | 0.6174 | likely_pathogenic | 0.6504 | pathogenic | -0.272 | Destabilizing | 0.55 | D | 0.287 | neutral | None | None | None | None | N |
F/L | 0.6542 | likely_pathogenic | 0.6941 | pathogenic | -0.651 | Destabilizing | 0.002 | N | 0.158 | neutral | N | 0.450883665 | None | None | N |
F/M | 0.3866 | ambiguous | 0.4298 | ambiguous | -0.435 | Destabilizing | 0.445 | N | 0.255 | neutral | None | None | None | None | N |
F/N | 0.4204 | ambiguous | 0.4596 | ambiguous | -0.186 | Destabilizing | 0.855 | D | 0.351 | neutral | None | None | None | None | N |
F/P | 0.9858 | likely_pathogenic | 0.9874 | pathogenic | -0.848 | Destabilizing | 0.992 | D | 0.355 | neutral | None | None | None | None | N |
F/Q | 0.5145 | ambiguous | 0.5582 | ambiguous | -0.272 | Destabilizing | 0.861 | D | 0.351 | neutral | None | None | None | None | N |
F/R | 0.4311 | ambiguous | 0.4637 | ambiguous | 0.288 | Stabilizing | 0.008 | N | 0.199 | neutral | None | None | None | None | N |
F/S | 0.1923 | likely_benign | 0.2168 | benign | -0.933 | Destabilizing | 0.148 | N | 0.229 | neutral | N | 0.402897717 | None | None | N |
F/T | 0.2443 | likely_benign | 0.2956 | benign | -0.84 | Destabilizing | 0.032 | N | 0.194 | neutral | None | None | None | None | N |
F/V | 0.0969 | likely_benign | 0.1111 | benign | -0.848 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.387658905 | None | None | N |
F/W | 0.5247 | ambiguous | 0.5646 | pathogenic | -0.289 | Destabilizing | 0.996 | D | 0.296 | neutral | None | None | None | None | N |
F/Y | 0.1379 | likely_benign | 0.145 | benign | -0.337 | Destabilizing | 0.625 | D | 0.245 | neutral | N | 0.458252354 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.