Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7520 | 22783;22784;22785 | chr2:178722105;178722104;178722103 | chr2:179586832;179586831;179586830 |
N2AB | 7203 | 21832;21833;21834 | chr2:178722105;178722104;178722103 | chr2:179586832;179586831;179586830 |
N2A | 6276 | 19051;19052;19053 | chr2:178722105;178722104;178722103 | chr2:179586832;179586831;179586830 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.972 | N | 0.487 | 0.349 | 0.27132560031 | gnomAD-4.0.0 | 7.00172E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.12625E-07 | 0 | 0 |
K/T | None | None | 0.039 | N | 0.235 | 0.261 | 0.277730125212 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3856 | ambiguous | 0.4205 | ambiguous | -0.397 | Destabilizing | 0.733 | D | 0.483 | neutral | None | None | None | None | I |
K/C | 0.8156 | likely_pathogenic | 0.8379 | pathogenic | -0.425 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
K/D | 0.7536 | likely_pathogenic | 0.7856 | pathogenic | 0.234 | Stabilizing | 0.979 | D | 0.507 | neutral | None | None | None | None | I |
K/E | 0.24 | likely_benign | 0.2645 | benign | 0.328 | Stabilizing | 0.75 | D | 0.499 | neutral | N | 0.491058206 | None | None | I |
K/F | 0.812 | likely_pathogenic | 0.853 | pathogenic | -0.131 | Destabilizing | 0.974 | D | 0.569 | neutral | None | None | None | None | I |
K/G | 0.6174 | likely_pathogenic | 0.6712 | pathogenic | -0.727 | Destabilizing | 0.93 | D | 0.529 | neutral | None | None | None | None | I |
K/H | 0.3822 | ambiguous | 0.4348 | ambiguous | -0.93 | Destabilizing | 0.993 | D | 0.523 | neutral | None | None | None | None | I |
K/I | 0.4232 | ambiguous | 0.4481 | ambiguous | 0.439 | Stabilizing | 0.406 | N | 0.533 | neutral | None | None | None | None | I |
K/L | 0.3621 | ambiguous | 0.4012 | ambiguous | 0.439 | Stabilizing | 0.163 | N | 0.513 | neutral | None | None | None | None | I |
K/M | 0.2736 | likely_benign | 0.3033 | benign | 0.149 | Stabilizing | 0.895 | D | 0.525 | neutral | N | 0.496736828 | None | None | I |
K/N | 0.5555 | ambiguous | 0.6152 | pathogenic | -0.132 | Destabilizing | 0.972 | D | 0.487 | neutral | N | 0.490212844 | None | None | I |
K/P | 0.4078 | ambiguous | 0.4318 | ambiguous | 0.19 | Stabilizing | 0.99 | D | 0.529 | neutral | None | None | None | None | I |
K/Q | 0.1425 | likely_benign | 0.1549 | benign | -0.188 | Destabilizing | 0.809 | D | 0.532 | neutral | N | 0.470490933 | None | None | I |
K/R | 0.0929 | likely_benign | 0.1011 | benign | -0.323 | Destabilizing | 0.013 | N | 0.233 | neutral | N | 0.492386358 | None | None | I |
K/S | 0.4895 | ambiguous | 0.5474 | ambiguous | -0.78 | Destabilizing | 0.869 | D | 0.469 | neutral | None | None | None | None | I |
K/T | 0.2018 | likely_benign | 0.2339 | benign | -0.487 | Destabilizing | 0.039 | N | 0.235 | neutral | N | 0.472723161 | None | None | I |
K/V | 0.3967 | ambiguous | 0.4341 | ambiguous | 0.19 | Stabilizing | 0.007 | N | 0.321 | neutral | None | None | None | None | I |
K/W | 0.8492 | likely_pathogenic | 0.8878 | pathogenic | -0.028 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
K/Y | 0.7067 | likely_pathogenic | 0.763 | pathogenic | 0.254 | Stabilizing | 0.93 | D | 0.573 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.