Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7521 | 22786;22787;22788 | chr2:178722102;178722101;178722100 | chr2:179586829;179586828;179586827 |
N2AB | 7204 | 21835;21836;21837 | chr2:178722102;178722101;178722100 | chr2:179586829;179586828;179586827 |
N2A | 6277 | 19054;19055;19056 | chr2:178722102;178722101;178722100 | chr2:179586829;179586828;179586827 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs752570029 | None | 0.005 | N | 0.385 | 0.296 | 0.184867976434 | gnomAD-4.0.0 | 6.99683E-07 | None | None | None | None | N | None | 0 | 2.5137E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | None | None | 0.063 | N | 0.505 | 0.279 | 0.336892272479 | gnomAD-4.0.0 | 6.99264E-07 | None | None | None | None | N | None | 3.11585E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs752570029 | -1.235 | 0.358 | N | 0.416 | 0.301 | 0.203808441222 | gnomAD-2.1.1 | 4.44E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.55E-06 | 0 |
P/T | None | None | 0.079 | N | 0.417 | 0.286 | 0.215109475489 | gnomAD-4.0.0 | 6.99684E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.12204E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2186 | likely_benign | 0.3418 | ambiguous | -1.575 | Destabilizing | 0.005 | N | 0.385 | neutral | N | 0.472345246 | None | None | N |
P/C | 0.9243 | likely_pathogenic | 0.9624 | pathogenic | -1.018 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/D | 0.98 | likely_pathogenic | 0.9898 | pathogenic | -1.394 | Destabilizing | 0.574 | D | 0.633 | neutral | None | None | None | None | N |
P/E | 0.9355 | likely_pathogenic | 0.964 | pathogenic | -1.337 | Destabilizing | 0.681 | D | 0.597 | neutral | None | None | None | None | N |
P/F | 0.9679 | likely_pathogenic | 0.9869 | pathogenic | -1.089 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/G | 0.8238 | likely_pathogenic | 0.9107 | pathogenic | -1.962 | Destabilizing | 0.873 | D | 0.592 | neutral | None | None | None | None | N |
P/H | 0.9454 | likely_pathogenic | 0.9759 | pathogenic | -1.566 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.491716949 | None | None | N |
P/I | 0.6927 | likely_pathogenic | 0.8145 | pathogenic | -0.584 | Destabilizing | 0.971 | D | 0.651 | neutral | None | None | None | None | N |
P/K | 0.9783 | likely_pathogenic | 0.9887 | pathogenic | -1.251 | Destabilizing | 0.986 | D | 0.594 | neutral | None | None | None | None | N |
P/L | 0.3232 | likely_benign | 0.4865 | ambiguous | -0.584 | Destabilizing | 0.063 | N | 0.505 | neutral | N | 0.403720783 | None | None | N |
P/M | 0.7314 | likely_pathogenic | 0.8407 | pathogenic | -0.443 | Destabilizing | 0.989 | D | 0.648 | neutral | None | None | None | None | N |
P/N | 0.944 | likely_pathogenic | 0.9738 | pathogenic | -1.121 | Destabilizing | 0.967 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/Q | 0.9014 | likely_pathogenic | 0.9494 | pathogenic | -1.203 | Destabilizing | 0.995 | D | 0.708 | prob.delet. | None | None | None | None | N |
P/R | 0.9504 | likely_pathogenic | 0.976 | pathogenic | -0.852 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | N | 0.477220318 | None | None | N |
P/S | 0.722 | likely_pathogenic | 0.8574 | pathogenic | -1.714 | Destabilizing | 0.358 | N | 0.416 | neutral | N | 0.47078831 | None | None | N |
P/T | 0.4137 | ambiguous | 0.6045 | pathogenic | -1.536 | Destabilizing | 0.079 | N | 0.417 | neutral | N | 0.47078831 | None | None | N |
P/V | 0.4945 | ambiguous | 0.6716 | pathogenic | -0.88 | Destabilizing | 0.711 | D | 0.573 | neutral | None | None | None | None | N |
P/W | 0.9924 | likely_pathogenic | 0.9972 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
P/Y | 0.9816 | likely_pathogenic | 0.9924 | pathogenic | -1.041 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.