Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7524 | 22795;22796;22797 | chr2:178722093;178722092;178722091 | chr2:179586820;179586819;179586818 |
N2AB | 7207 | 21844;21845;21846 | chr2:178722093;178722092;178722091 | chr2:179586820;179586819;179586818 |
N2A | 6280 | 19063;19064;19065 | chr2:178722093;178722092;178722091 | chr2:179586820;179586819;179586818 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.642 | N | 0.364 | 0.315 | 0.669942640896 | gnomAD-4.0.0 | 1.61251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.47063E-05 | 0 |
I/V | None | None | 0.01 | N | 0.117 | 0.187 | 0.42805410278 | gnomAD-4.0.0 | 3.22771E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89729E-06 | 1.47336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1297 | likely_benign | 0.1456 | benign | -1.483 | Destabilizing | 0.495 | N | 0.371 | neutral | None | None | None | None | N |
I/C | 0.6595 | likely_pathogenic | 0.6916 | pathogenic | -0.967 | Destabilizing | 0.995 | D | 0.365 | neutral | None | None | None | None | N |
I/D | 0.593 | likely_pathogenic | 0.6595 | pathogenic | -0.432 | Destabilizing | 0.704 | D | 0.461 | neutral | None | None | None | None | N |
I/E | 0.3595 | ambiguous | 0.4092 | ambiguous | -0.383 | Destabilizing | 0.329 | N | 0.392 | neutral | None | None | None | None | N |
I/F | 0.1422 | likely_benign | 0.1707 | benign | -0.887 | Destabilizing | 0.944 | D | 0.399 | neutral | None | None | None | None | N |
I/G | 0.4261 | ambiguous | 0.4892 | ambiguous | -1.846 | Destabilizing | 0.704 | D | 0.432 | neutral | None | None | None | None | N |
I/H | 0.4145 | ambiguous | 0.486 | ambiguous | -1.036 | Destabilizing | 0.944 | D | 0.409 | neutral | None | None | None | None | N |
I/K | 0.1967 | likely_benign | 0.2279 | benign | -0.852 | Destabilizing | 0.006 | N | 0.393 | neutral | N | 0.516975371 | None | None | N |
I/L | 0.094 | likely_benign | 0.1054 | benign | -0.553 | Destabilizing | 0.139 | N | 0.235 | neutral | N | 0.474952603 | None | None | N |
I/M | 0.0679 | likely_benign | 0.076 | benign | -0.548 | Destabilizing | 0.927 | D | 0.412 | neutral | D | 0.529019161 | None | None | N |
I/N | 0.2795 | likely_benign | 0.3242 | benign | -0.749 | Destabilizing | 0.893 | D | 0.483 | neutral | None | None | None | None | N |
I/P | 0.6759 | likely_pathogenic | 0.7401 | pathogenic | -0.831 | Destabilizing | 0.944 | D | 0.483 | neutral | None | None | None | None | N |
I/Q | 0.2552 | likely_benign | 0.3046 | benign | -0.81 | Destabilizing | 0.037 | N | 0.361 | neutral | None | None | None | None | N |
I/R | 0.1478 | likely_benign | 0.1797 | benign | -0.44 | Destabilizing | 0.473 | N | 0.461 | neutral | N | 0.510049399 | None | None | N |
I/S | 0.1958 | likely_benign | 0.2301 | benign | -1.475 | Destabilizing | 0.704 | D | 0.358 | neutral | None | None | None | None | N |
I/T | 0.08 | likely_benign | 0.0883 | benign | -1.291 | Destabilizing | 0.642 | D | 0.364 | neutral | N | 0.482785439 | None | None | N |
I/V | 0.0626 | likely_benign | 0.0645 | benign | -0.831 | Destabilizing | 0.01 | N | 0.117 | neutral | N | 0.44920601 | None | None | N |
I/W | 0.6532 | likely_pathogenic | 0.7254 | pathogenic | -0.972 | Destabilizing | 0.995 | D | 0.453 | neutral | None | None | None | None | N |
I/Y | 0.5039 | ambiguous | 0.5594 | ambiguous | -0.717 | Destabilizing | 0.981 | D | 0.452 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.