Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7533 | 22822;22823;22824 | chr2:178722066;178722065;178722064 | chr2:179586793;179586792;179586791 |
N2AB | 7216 | 21871;21872;21873 | chr2:178722066;178722065;178722064 | chr2:179586793;179586792;179586791 |
N2A | 6289 | 19090;19091;19092 | chr2:178722066;178722065;178722064 | chr2:179586793;179586792;179586791 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs371762361 | -0.522 | 0.324 | N | 0.518 | 0.179 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
D/N | rs371762361 | -0.522 | 0.324 | N | 0.518 | 0.179 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs371762361 | -0.522 | 0.324 | N | 0.518 | 0.179 | None | gnomAD-4.0.0 | 6.57151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2713 | likely_benign | 0.2925 | benign | -0.36 | Destabilizing | 0.09 | N | 0.479 | neutral | N | 0.419439597 | None | None | N |
D/C | 0.8422 | likely_pathogenic | 0.8383 | pathogenic | -0.224 | Destabilizing | 0.981 | D | 0.617 | neutral | None | None | None | None | N |
D/E | 0.2813 | likely_benign | 0.3229 | benign | -0.62 | Destabilizing | 0.003 | N | 0.279 | neutral | N | 0.352041169 | None | None | N |
D/F | 0.6932 | likely_pathogenic | 0.7404 | pathogenic | 0.25 | Stabilizing | 0.932 | D | 0.603 | neutral | None | None | None | None | N |
D/G | 0.3795 | ambiguous | 0.43 | ambiguous | -0.739 | Destabilizing | 0.001 | N | 0.353 | neutral | N | 0.496630944 | None | None | N |
D/H | 0.4052 | ambiguous | 0.4537 | ambiguous | -0.021 | Destabilizing | 0.912 | D | 0.561 | neutral | N | 0.364125032 | None | None | N |
D/I | 0.4078 | ambiguous | 0.4348 | ambiguous | 0.647 | Stabilizing | 0.818 | D | 0.6 | neutral | None | None | None | None | N |
D/K | 0.6081 | likely_pathogenic | 0.663 | pathogenic | -0.349 | Destabilizing | 0.388 | N | 0.463 | neutral | None | None | None | None | N |
D/L | 0.4846 | ambiguous | 0.5441 | ambiguous | 0.647 | Stabilizing | 0.818 | D | 0.589 | neutral | None | None | None | None | N |
D/M | 0.7127 | likely_pathogenic | 0.7531 | pathogenic | 0.968 | Stabilizing | 0.981 | D | 0.599 | neutral | None | None | None | None | N |
D/N | 0.1293 | likely_benign | 0.1393 | benign | -0.888 | Destabilizing | 0.324 | N | 0.518 | neutral | N | 0.412705626 | None | None | N |
D/P | 0.934 | likely_pathogenic | 0.9561 | pathogenic | 0.338 | Stabilizing | 0.818 | D | 0.564 | neutral | None | None | None | None | N |
D/Q | 0.5065 | ambiguous | 0.5786 | pathogenic | -0.69 | Destabilizing | 0.69 | D | 0.531 | neutral | None | None | None | None | N |
D/R | 0.5814 | likely_pathogenic | 0.6461 | pathogenic | -0.107 | Destabilizing | 0.69 | D | 0.579 | neutral | None | None | None | None | N |
D/S | 0.1677 | likely_benign | 0.1891 | benign | -1.128 | Destabilizing | 0.024 | N | 0.419 | neutral | None | None | None | None | N |
D/T | 0.2983 | likely_benign | 0.331 | benign | -0.808 | Destabilizing | 0.241 | N | 0.459 | neutral | None | None | None | None | N |
D/V | 0.2441 | likely_benign | 0.2585 | benign | 0.338 | Stabilizing | 0.773 | D | 0.59 | neutral | N | 0.379822416 | None | None | N |
D/W | 0.9342 | likely_pathogenic | 0.9485 | pathogenic | 0.442 | Stabilizing | 0.981 | D | 0.618 | neutral | None | None | None | None | N |
D/Y | 0.3262 | likely_benign | 0.3485 | ambiguous | 0.493 | Stabilizing | 0.912 | D | 0.603 | neutral | N | 0.434158333 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.