Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7535 | 22828;22829;22830 | chr2:178722060;178722059;178722058 | chr2:179586787;179586786;179586785 |
N2AB | 7218 | 21877;21878;21879 | chr2:178722060;178722059;178722058 | chr2:179586787;179586786;179586785 |
N2A | 6291 | 19096;19097;19098 | chr2:178722060;178722059;178722058 | chr2:179586787;179586786;179586785 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs773956492 | None | 0.896 | N | 0.623 | 0.507 | 0.644471222209 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2246 | likely_benign | 0.2751 | benign | -0.906 | Destabilizing | 0.896 | D | 0.532 | neutral | N | 0.49069644 | None | None | I |
E/C | 0.9342 | likely_pathogenic | 0.9402 | pathogenic | -0.62 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | I |
E/D | 0.3161 | likely_benign | 0.3955 | ambiguous | -1.255 | Destabilizing | 0.896 | D | 0.479 | neutral | N | 0.514108424 | None | None | I |
E/F | 0.8473 | likely_pathogenic | 0.8831 | pathogenic | -0.393 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/G | 0.4437 | ambiguous | 0.4902 | ambiguous | -1.296 | Destabilizing | 0.896 | D | 0.623 | neutral | N | 0.514929988 | None | None | I |
E/H | 0.5877 | likely_pathogenic | 0.67 | pathogenic | -0.876 | Destabilizing | 0.988 | D | 0.549 | neutral | None | None | None | None | I |
E/I | 0.4507 | ambiguous | 0.5107 | ambiguous | 0.17 | Stabilizing | 0.976 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/K | 0.2371 | likely_benign | 0.2701 | benign | -1.202 | Destabilizing | 0.811 | D | 0.501 | neutral | N | 0.510990761 | None | None | I |
E/L | 0.5497 | ambiguous | 0.6379 | pathogenic | 0.17 | Stabilizing | 0.919 | D | 0.637 | neutral | None | None | None | None | I |
E/M | 0.5829 | likely_pathogenic | 0.6403 | pathogenic | 0.698 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/N | 0.5093 | ambiguous | 0.5987 | pathogenic | -1.506 | Destabilizing | 0.919 | D | 0.483 | neutral | None | None | None | None | I |
E/P | 0.9317 | likely_pathogenic | 0.9671 | pathogenic | -0.168 | Destabilizing | 0.988 | D | 0.649 | neutral | None | None | None | None | I |
E/Q | 0.15 | likely_benign | 0.176 | benign | -1.309 | Destabilizing | 0.211 | N | 0.408 | neutral | D | 0.527768368 | None | None | I |
E/R | 0.3503 | ambiguous | 0.4076 | ambiguous | -0.953 | Destabilizing | 0.261 | N | 0.391 | neutral | None | None | None | None | I |
E/S | 0.2852 | likely_benign | 0.3495 | ambiguous | -1.888 | Destabilizing | 0.851 | D | 0.441 | neutral | None | None | None | None | I |
E/T | 0.2698 | likely_benign | 0.3331 | benign | -1.575 | Destabilizing | 0.132 | N | 0.435 | neutral | None | None | None | None | I |
E/V | 0.2788 | likely_benign | 0.33 | benign | -0.168 | Destabilizing | 0.968 | D | 0.642 | neutral | D | 0.52528821 | None | None | I |
E/W | 0.9573 | likely_pathogenic | 0.9647 | pathogenic | -0.268 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/Y | 0.7872 | likely_pathogenic | 0.8299 | pathogenic | -0.221 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.