Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7539 | 22840;22841;22842 | chr2:178722048;178722047;178722046 | chr2:179586775;179586774;179586773 |
N2AB | 7222 | 21889;21890;21891 | chr2:178722048;178722047;178722046 | chr2:179586775;179586774;179586773 |
N2A | 6295 | 19108;19109;19110 | chr2:178722048;178722047;178722046 | chr2:179586775;179586774;179586773 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs879209114 | None | 0.826 | N | 0.496 | 0.261 | 0.506613155829 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1044 | likely_benign | 0.1344 | benign | -0.937 | Destabilizing | 0.083 | N | 0.443 | neutral | N | 0.486132389 | None | None | I |
T/C | 0.6429 | likely_pathogenic | 0.7563 | pathogenic | -0.355 | Destabilizing | 0.998 | D | 0.562 | neutral | None | None | None | None | I |
T/D | 0.4876 | ambiguous | 0.6087 | pathogenic | -0.584 | Destabilizing | 0.862 | D | 0.501 | neutral | None | None | None | None | I |
T/E | 0.3495 | ambiguous | 0.4341 | ambiguous | -0.523 | Destabilizing | 0.954 | D | 0.515 | neutral | None | None | None | None | I |
T/F | 0.2612 | likely_benign | 0.3942 | ambiguous | -0.726 | Destabilizing | 0.987 | D | 0.609 | neutral | None | None | None | None | I |
T/G | 0.3716 | ambiguous | 0.4433 | ambiguous | -1.269 | Destabilizing | 0.882 | D | 0.527 | neutral | None | None | None | None | I |
T/H | 0.3177 | likely_benign | 0.4382 | ambiguous | -1.479 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
T/I | 0.1725 | likely_benign | 0.3299 | benign | -0.114 | Destabilizing | 0.044 | N | 0.241 | neutral | N | 0.480726569 | None | None | I |
T/K | 0.2483 | likely_benign | 0.3146 | benign | -0.871 | Destabilizing | 0.967 | D | 0.503 | neutral | None | None | None | None | I |
T/L | 0.1194 | likely_benign | 0.1928 | benign | -0.114 | Destabilizing | 0.589 | D | 0.477 | neutral | None | None | None | None | I |
T/M | 0.0936 | likely_benign | 0.1175 | benign | 0.199 | Stabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | I |
T/N | 0.1705 | likely_benign | 0.2392 | benign | -0.947 | Destabilizing | 0.826 | D | 0.496 | neutral | N | 0.503699429 | None | None | I |
T/P | 0.5802 | likely_pathogenic | 0.6755 | pathogenic | -0.356 | Destabilizing | 0.906 | D | 0.569 | neutral | N | 0.5111181 | None | None | I |
T/Q | 0.2541 | likely_benign | 0.3215 | benign | -0.956 | Destabilizing | 0.965 | D | 0.57 | neutral | None | None | None | None | I |
T/R | 0.1724 | likely_benign | 0.2308 | benign | -0.741 | Destabilizing | 0.987 | D | 0.573 | neutral | None | None | None | None | I |
T/S | 0.1171 | likely_benign | 0.14 | benign | -1.19 | Destabilizing | 0.006 | N | 0.151 | neutral | N | 0.463370172 | None | None | I |
T/V | 0.1586 | likely_benign | 0.2635 | benign | -0.356 | Destabilizing | 0.506 | D | 0.451 | neutral | None | None | None | None | I |
T/W | 0.6128 | likely_pathogenic | 0.7307 | pathogenic | -0.758 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
T/Y | 0.3718 | ambiguous | 0.5022 | ambiguous | -0.53 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.