Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7541 | 22846;22847;22848 | chr2:178722042;178722041;178722040 | chr2:179586769;179586768;179586767 |
N2AB | 7224 | 21895;21896;21897 | chr2:178722042;178722041;178722040 | chr2:179586769;179586768;179586767 |
N2A | 6297 | 19114;19115;19116 | chr2:178722042;178722041;178722040 | chr2:179586769;179586768;179586767 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs2078459574 | None | 0.939 | N | 0.448 | 0.321 | 0.418221603839 | gnomAD-4.0.0 | 1.30054E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70948E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5861 | likely_pathogenic | 0.6006 | pathogenic | -0.537 | Destabilizing | 0.02 | N | 0.261 | neutral | None | None | None | None | I |
A/D | 0.2046 | likely_benign | 0.2128 | benign | -1.071 | Destabilizing | 0.684 | D | 0.563 | neutral | N | 0.342774765 | None | None | I |
A/E | 0.1931 | likely_benign | 0.1972 | benign | -1.221 | Destabilizing | 0.742 | D | 0.445 | neutral | None | None | None | None | I |
A/F | 0.2863 | likely_benign | 0.2919 | benign | -1.112 | Destabilizing | 0.953 | D | 0.577 | neutral | None | None | None | None | I |
A/G | 0.1398 | likely_benign | 0.1432 | benign | -0.631 | Destabilizing | 0.684 | D | 0.338 | neutral | N | 0.490154129 | None | None | I |
A/H | 0.483 | ambiguous | 0.4763 | ambiguous | -0.826 | Destabilizing | 0.996 | D | 0.565 | neutral | None | None | None | None | I |
A/I | 0.2322 | likely_benign | 0.2373 | benign | -0.46 | Destabilizing | 0.91 | D | 0.433 | neutral | None | None | None | None | I |
A/K | 0.5103 | ambiguous | 0.5111 | ambiguous | -0.972 | Destabilizing | 0.742 | D | 0.447 | neutral | None | None | None | None | I |
A/L | 0.1742 | likely_benign | 0.1789 | benign | -0.46 | Destabilizing | 0.59 | D | 0.4 | neutral | None | None | None | None | I |
A/M | 0.2083 | likely_benign | 0.2064 | benign | -0.258 | Destabilizing | 0.996 | D | 0.439 | neutral | None | None | None | None | I |
A/N | 0.2087 | likely_benign | 0.2091 | benign | -0.454 | Destabilizing | 0.91 | D | 0.567 | neutral | None | None | None | None | I |
A/P | 0.2572 | likely_benign | 0.271 | benign | -0.45 | Destabilizing | 0.939 | D | 0.448 | neutral | N | 0.477667621 | None | None | I |
A/Q | 0.3337 | likely_benign | 0.3307 | benign | -0.788 | Destabilizing | 0.953 | D | 0.45 | neutral | None | None | None | None | I |
A/R | 0.4326 | ambiguous | 0.4309 | ambiguous | -0.434 | Destabilizing | 0.953 | D | 0.46 | neutral | None | None | None | None | I |
A/S | 0.0753 | likely_benign | 0.0752 | benign | -0.587 | Destabilizing | 0.034 | N | 0.184 | neutral | N | 0.365131549 | None | None | I |
A/T | 0.0711 | likely_benign | 0.0709 | benign | -0.676 | Destabilizing | 0.012 | N | 0.182 | neutral | N | 0.434722134 | None | None | I |
A/V | 0.1235 | likely_benign | 0.127 | benign | -0.45 | Destabilizing | 0.521 | D | 0.353 | neutral | N | 0.434356774 | None | None | I |
A/W | 0.7107 | likely_pathogenic | 0.7237 | pathogenic | -1.295 | Destabilizing | 0.996 | D | 0.638 | neutral | None | None | None | None | I |
A/Y | 0.4483 | ambiguous | 0.4521 | ambiguous | -0.965 | Destabilizing | 0.984 | D | 0.579 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.