Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7547 | 22864;22865;22866 | chr2:178722024;178722023;178722022 | chr2:179586751;179586750;179586749 |
N2AB | 7230 | 21913;21914;21915 | chr2:178722024;178722023;178722022 | chr2:179586751;179586750;179586749 |
N2A | 6303 | 19132;19133;19134 | chr2:178722024;178722023;178722022 | chr2:179586751;179586750;179586749 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1437517914 | -1.179 | 0.573 | N | 0.519 | 0.17 | 0.210429274316 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/S | rs1437517914 | -1.179 | 0.573 | N | 0.519 | 0.17 | 0.210429274316 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1437517914 | -1.179 | 0.573 | N | 0.519 | 0.17 | 0.210429274316 | gnomAD-4.0.0 | 2.56298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78829E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0897 | likely_benign | 0.0916 | benign | -0.833 | Destabilizing | 0.008 | N | 0.322 | neutral | N | 0.512433556 | None | None | N |
T/C | 0.4419 | ambiguous | 0.4623 | ambiguous | -0.493 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
T/D | 0.5748 | likely_pathogenic | 0.5746 | pathogenic | -0.359 | Destabilizing | 0.987 | D | 0.568 | neutral | None | None | None | None | N |
T/E | 0.4664 | ambiguous | 0.467 | ambiguous | -0.325 | Destabilizing | 0.973 | D | 0.526 | neutral | None | None | None | None | N |
T/F | 0.1723 | likely_benign | 0.1813 | benign | -0.762 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/G | 0.2794 | likely_benign | 0.2976 | benign | -1.132 | Destabilizing | 0.979 | D | 0.578 | neutral | None | None | None | None | N |
T/H | 0.2407 | likely_benign | 0.2373 | benign | -1.375 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
T/I | 0.116 | likely_benign | 0.1172 | benign | -0.116 | Destabilizing | 0.993 | D | 0.599 | neutral | N | 0.489308767 | None | None | N |
T/K | 0.2642 | likely_benign | 0.2584 | benign | -0.766 | Destabilizing | 0.406 | N | 0.403 | neutral | None | None | None | None | N |
T/L | 0.0905 | likely_benign | 0.0981 | benign | -0.116 | Destabilizing | 0.981 | D | 0.517 | neutral | None | None | None | None | N |
T/M | 0.0899 | likely_benign | 0.0923 | benign | 0.076 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
T/N | 0.1445 | likely_benign | 0.1479 | benign | -0.783 | Destabilizing | 0.983 | D | 0.51 | neutral | N | 0.520938396 | None | None | N |
T/P | 0.5981 | likely_pathogenic | 0.6456 | pathogenic | -0.322 | Destabilizing | 0.983 | D | 0.599 | neutral | N | 0.510953516 | None | None | N |
T/Q | 0.2558 | likely_benign | 0.25 | benign | -0.862 | Destabilizing | 0.988 | D | 0.6 | neutral | None | None | None | None | N |
T/R | 0.2011 | likely_benign | 0.2002 | benign | -0.592 | Destabilizing | 0.809 | D | 0.394 | neutral | None | None | None | None | N |
T/S | 0.0975 | likely_benign | 0.1027 | benign | -1.04 | Destabilizing | 0.573 | D | 0.519 | neutral | N | 0.416037585 | None | None | N |
T/V | 0.1085 | likely_benign | 0.111 | benign | -0.322 | Destabilizing | 0.948 | D | 0.485 | neutral | None | None | None | None | N |
T/W | 0.5559 | ambiguous | 0.5659 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/Y | 0.2694 | likely_benign | 0.2741 | benign | -0.498 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.