Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7550 | 22873;22874;22875 | chr2:178722015;178722014;178722013 | chr2:179586742;179586741;179586740 |
N2AB | 7233 | 21922;21923;21924 | chr2:178722015;178722014;178722013 | chr2:179586742;179586741;179586740 |
N2A | 6306 | 19141;19142;19143 | chr2:178722015;178722014;178722013 | chr2:179586742;179586741;179586740 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1460815999 | -1.266 | 1.0 | N | 0.651 | 0.421 | 0.306377322295 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
K/N | rs1460815999 | -1.266 | 1.0 | N | 0.651 | 0.421 | 0.306377322295 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1460815999 | -1.266 | 1.0 | N | 0.651 | 0.421 | 0.306377322295 | gnomAD-4.0.0 | 4.33862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93427E-06 | 0 | 0 |
K/Q | rs772516390 | -1.151 | 0.999 | N | 0.628 | 0.447 | 0.346768085243 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9677 | likely_pathogenic | 0.9809 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | N |
K/C | 0.9736 | likely_pathogenic | 0.9765 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/D | 0.9965 | likely_pathogenic | 0.9978 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/E | 0.9235 | likely_pathogenic | 0.9568 | pathogenic | -0.674 | Destabilizing | 0.997 | D | 0.521 | neutral | D | 0.522043791 | None | None | N |
K/F | 0.9805 | likely_pathogenic | 0.9861 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
K/G | 0.9854 | likely_pathogenic | 0.9911 | pathogenic | -1.682 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
K/H | 0.7501 | likely_pathogenic | 0.7921 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/I | 0.938 | likely_pathogenic | 0.9521 | pathogenic | -0.08 | Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.492632456 | None | None | N |
K/L | 0.8958 | likely_pathogenic | 0.9264 | pathogenic | -0.08 | Destabilizing | 0.997 | D | 0.664 | neutral | None | None | None | None | N |
K/M | 0.859 | likely_pathogenic | 0.8934 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/N | 0.9845 | likely_pathogenic | 0.9896 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.506648561 | None | None | N |
K/P | 0.9978 | likely_pathogenic | 0.9987 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Q | 0.6533 | likely_pathogenic | 0.7526 | pathogenic | -1.149 | Destabilizing | 0.999 | D | 0.628 | neutral | N | 0.500545721 | None | None | N |
K/R | 0.0952 | likely_benign | 0.117 | benign | -0.952 | Destabilizing | 0.869 | D | 0.373 | neutral | N | 0.48012827 | None | None | N |
K/S | 0.984 | likely_pathogenic | 0.991 | pathogenic | -1.962 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
K/T | 0.9532 | likely_pathogenic | 0.9754 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.506395071 | None | None | N |
K/V | 0.9074 | likely_pathogenic | 0.9303 | pathogenic | -0.444 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.9652 | likely_pathogenic | 0.9748 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/Y | 0.9527 | likely_pathogenic | 0.9593 | pathogenic | -0.484 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.