Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7554 | 22885;22886;22887 | chr2:178722003;178722002;178722001 | chr2:179586730;179586729;179586728 |
N2AB | 7237 | 21934;21935;21936 | chr2:178722003;178722002;178722001 | chr2:179586730;179586729;179586728 |
N2A | 6310 | 19153;19154;19155 | chr2:178722003;178722002;178722001 | chr2:179586730;179586729;179586728 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs879075975 | None | 0.003 | D | 0.18 | 0.115 | 0.371344866733 | gnomAD-4.0.0 | 1.36866E-06 | None | None | None | None | N | None | 2.98918E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99619E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2316 | likely_benign | 0.2378 | benign | -0.383 | Destabilizing | 0.975 | D | 0.576 | neutral | N | 0.480187851 | None | None | N |
E/C | 0.9614 | likely_pathogenic | 0.9631 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/D | 0.1489 | likely_benign | 0.1407 | benign | -0.393 | Destabilizing | 0.003 | N | 0.18 | neutral | D | 0.527266935 | None | None | N |
E/F | 0.902 | likely_pathogenic | 0.9022 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.3968 | ambiguous | 0.4041 | ambiguous | -0.591 | Destabilizing | 0.985 | D | 0.591 | neutral | N | 0.495002081 | None | None | N |
E/H | 0.7965 | likely_pathogenic | 0.8113 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/I | 0.4469 | ambiguous | 0.4314 | ambiguous | 0.132 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
E/K | 0.4376 | ambiguous | 0.448 | ambiguous | 0.344 | Stabilizing | 0.973 | D | 0.518 | neutral | N | 0.496925386 | None | None | N |
E/L | 0.5393 | ambiguous | 0.5472 | ambiguous | 0.132 | Stabilizing | 0.994 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.6101 | likely_pathogenic | 0.605 | pathogenic | 0.233 | Stabilizing | 0.997 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/N | 0.4374 | ambiguous | 0.447 | ambiguous | -0.01 | Destabilizing | 0.974 | D | 0.592 | neutral | None | None | None | None | N |
E/P | 0.4811 | ambiguous | 0.494 | ambiguous | -0.019 | Destabilizing | 0.986 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/Q | 0.2938 | likely_benign | 0.3079 | benign | 0.032 | Stabilizing | 0.995 | D | 0.573 | neutral | N | 0.502909995 | None | None | N |
E/R | 0.6224 | likely_pathogenic | 0.6508 | pathogenic | 0.515 | Stabilizing | 0.997 | D | 0.662 | neutral | None | None | None | None | N |
E/S | 0.4489 | ambiguous | 0.4706 | ambiguous | -0.155 | Destabilizing | 0.963 | D | 0.522 | neutral | None | None | None | None | N |
E/T | 0.3938 | ambiguous | 0.3851 | ambiguous | 0.016 | Stabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | N |
E/V | 0.2631 | likely_benign | 0.2451 | benign | -0.019 | Destabilizing | 0.996 | D | 0.737 | prob.delet. | N | 0.498658969 | None | None | N |
E/W | 0.973 | likely_pathogenic | 0.976 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/Y | 0.8326 | likely_pathogenic | 0.8335 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.