Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7555 | 22888;22889;22890 | chr2:178722000;178721999;178721998 | chr2:179586727;179586726;179586725 |
N2AB | 7238 | 21937;21938;21939 | chr2:178722000;178721999;178721998 | chr2:179586727;179586726;179586725 |
N2A | 6311 | 19156;19157;19158 | chr2:178722000;178721999;178721998 | chr2:179586727;179586726;179586725 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.001 | N | 0.199 | 0.146 | 0.306377322295 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
I/V | rs747649130 | -1.273 | 0.072 | N | 0.415 | 0.144 | 0.363158594168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs747649130 | -1.273 | 0.072 | N | 0.415 | 0.144 | 0.363158594168 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs747649130 | -1.273 | 0.072 | N | 0.415 | 0.144 | 0.363158594168 | gnomAD-4.0.0 | 6.57212E-06 | None | None | None | None | N | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9775 | likely_pathogenic | 0.9828 | pathogenic | -2.486 | Highly Destabilizing | 0.967 | D | 0.551 | neutral | None | None | None | None | N |
I/C | 0.9902 | likely_pathogenic | 0.9922 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.663 | Highly Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
I/E | 0.9952 | likely_pathogenic | 0.9959 | pathogenic | -2.425 | Highly Destabilizing | 0.994 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/F | 0.7055 | likely_pathogenic | 0.7419 | pathogenic | -1.533 | Destabilizing | 0.939 | D | 0.552 | neutral | N | 0.502790442 | None | None | N |
I/G | 0.9949 | likely_pathogenic | 0.9958 | pathogenic | -3.028 | Highly Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/H | 0.993 | likely_pathogenic | 0.9952 | pathogenic | -2.406 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
I/K | 0.9857 | likely_pathogenic | 0.989 | pathogenic | -1.964 | Destabilizing | 0.86 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/L | 0.1856 | likely_benign | 0.2772 | benign | -0.915 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.416882947 | None | None | N |
I/M | 0.3237 | likely_benign | 0.3752 | ambiguous | -0.845 | Destabilizing | 0.193 | N | 0.416 | neutral | N | 0.487559796 | None | None | N |
I/N | 0.9799 | likely_pathogenic | 0.9816 | pathogenic | -2.31 | Highly Destabilizing | 0.998 | D | 0.761 | deleterious | D | 0.527833684 | None | None | N |
I/P | 0.9918 | likely_pathogenic | 0.9932 | pathogenic | -1.42 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
I/Q | 0.9884 | likely_pathogenic | 0.9921 | pathogenic | -2.147 | Highly Destabilizing | 0.989 | D | 0.764 | deleterious | None | None | None | None | N |
I/R | 0.9818 | likely_pathogenic | 0.9866 | pathogenic | -1.753 | Destabilizing | 0.988 | D | 0.757 | deleterious | None | None | None | None | N |
I/S | 0.9868 | likely_pathogenic | 0.9893 | pathogenic | -3.009 | Highly Destabilizing | 0.994 | D | 0.64 | neutral | N | 0.518932914 | None | None | N |
I/T | 0.9776 | likely_pathogenic | 0.9817 | pathogenic | -2.61 | Highly Destabilizing | 0.87 | D | 0.584 | neutral | N | 0.51976538 | None | None | N |
I/V | 0.2701 | likely_benign | 0.3053 | benign | -1.42 | Destabilizing | 0.072 | N | 0.415 | neutral | N | 0.472376445 | None | None | N |
I/W | 0.9877 | likely_pathogenic | 0.9911 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
I/Y | 0.9629 | likely_pathogenic | 0.9694 | pathogenic | -1.555 | Destabilizing | 0.907 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.