Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7560 | 22903;22904;22905 | chr2:178721985;178721984;178721983 | chr2:179586712;179586711;179586710 |
N2AB | 7243 | 21952;21953;21954 | chr2:178721985;178721984;178721983 | chr2:179586712;179586711;179586710 |
N2A | 6316 | 19171;19172;19173 | chr2:178721985;178721984;178721983 | chr2:179586712;179586711;179586710 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.943 | N | 0.403 | 0.218 | 0.173771789658 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5472 | ambiguous | 0.6288 | pathogenic | -0.803 | Destabilizing | 0.593 | D | 0.432 | neutral | None | None | None | None | N |
N/C | 0.6883 | likely_pathogenic | 0.7466 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
N/D | 0.5236 | ambiguous | 0.5581 | ambiguous | 0.372 | Stabilizing | 0.943 | D | 0.403 | neutral | N | 0.411148188 | None | None | N |
N/E | 0.8592 | likely_pathogenic | 0.9007 | pathogenic | 0.42 | Stabilizing | 0.986 | D | 0.366 | neutral | None | None | None | None | N |
N/F | 0.8086 | likely_pathogenic | 0.8404 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
N/G | 0.6055 | likely_pathogenic | 0.6788 | pathogenic | -1.075 | Destabilizing | 0.995 | D | 0.369 | neutral | None | None | None | None | N |
N/H | 0.2497 | likely_benign | 0.3078 | benign | -0.731 | Destabilizing | 0.999 | D | 0.449 | neutral | N | 0.421826541 | None | None | N |
N/I | 0.4558 | ambiguous | 0.5125 | ambiguous | -0.137 | Destabilizing | 0.996 | D | 0.586 | neutral | N | 0.456285832 | None | None | N |
N/K | 0.6288 | likely_pathogenic | 0.7399 | pathogenic | 0.081 | Stabilizing | 0.732 | D | 0.229 | neutral | N | 0.392636998 | None | None | N |
N/L | 0.4596 | ambiguous | 0.5327 | ambiguous | -0.137 | Destabilizing | 0.99 | D | 0.52 | neutral | None | None | None | None | N |
N/M | 0.6219 | likely_pathogenic | 0.6848 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | N |
N/P | 0.7631 | likely_pathogenic | 0.8004 | pathogenic | -0.33 | Destabilizing | 0.998 | D | 0.52 | neutral | None | None | None | None | N |
N/Q | 0.6474 | likely_pathogenic | 0.75 | pathogenic | -0.439 | Destabilizing | 0.997 | D | 0.419 | neutral | None | None | None | None | N |
N/R | 0.6659 | likely_pathogenic | 0.7609 | pathogenic | 0.114 | Stabilizing | 0.993 | D | 0.417 | neutral | None | None | None | None | N |
N/S | 0.1557 | likely_benign | 0.183 | benign | -0.521 | Destabilizing | 0.393 | N | 0.225 | neutral | N | 0.424077413 | None | None | N |
N/T | 0.3358 | likely_benign | 0.4 | ambiguous | -0.28 | Destabilizing | 0.254 | N | 0.219 | neutral | N | 0.435833202 | None | None | N |
N/V | 0.5151 | ambiguous | 0.5992 | pathogenic | -0.33 | Destabilizing | 0.967 | D | 0.527 | neutral | None | None | None | None | N |
N/W | 0.9331 | likely_pathogenic | 0.9487 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
N/Y | 0.3539 | ambiguous | 0.3966 | ambiguous | -0.347 | Destabilizing | 1.0 | D | 0.557 | neutral | N | 0.446588913 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.