Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7567 | 22924;22925;22926 | chr2:178721964;178721963;178721962 | chr2:179586691;179586690;179586689 |
N2AB | 7250 | 21973;21974;21975 | chr2:178721964;178721963;178721962 | chr2:179586691;179586690;179586689 |
N2A | 6323 | 19192;19193;19194 | chr2:178721964;178721963;178721962 | chr2:179586691;179586690;179586689 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs764311341 | 0.066 | 0.002 | N | 0.085 | 0.222 | 0.0986583533028 | gnomAD-4.0.0 | 6.84327E-07 | None | None | None | None | I | None | 0 | 0 | None | 3.82907E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/E | rs764311341 | None | 0.023 | N | 0.189 | 0.258 | 0.251116650651 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79924E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.131 | likely_benign | 0.1595 | benign | -0.162 | Destabilizing | 0.002 | N | 0.085 | neutral | N | 0.499252749 | None | None | I |
G/C | 0.3694 | ambiguous | 0.3824 | ambiguous | -0.639 | Destabilizing | 0.985 | D | 0.361 | neutral | None | None | None | None | I |
G/D | 0.1424 | likely_benign | 0.1578 | benign | -0.977 | Destabilizing | 0.003 | N | 0.146 | neutral | None | None | None | None | I |
G/E | 0.1615 | likely_benign | 0.1672 | benign | -1.155 | Destabilizing | 0.023 | N | 0.189 | neutral | N | 0.471103355 | None | None | I |
G/F | 0.6693 | likely_pathogenic | 0.7347 | pathogenic | -1.059 | Destabilizing | 0.944 | D | 0.389 | neutral | None | None | None | None | I |
G/H | 0.3916 | ambiguous | 0.4477 | ambiguous | -0.433 | Destabilizing | 0.944 | D | 0.349 | neutral | None | None | None | None | I |
G/I | 0.4771 | ambiguous | 0.555 | ambiguous | -0.407 | Destabilizing | 0.893 | D | 0.421 | neutral | None | None | None | None | I |
G/K | 0.4073 | ambiguous | 0.4445 | ambiguous | -0.772 | Destabilizing | 0.704 | D | 0.281 | neutral | None | None | None | None | I |
G/L | 0.472 | ambiguous | 0.5578 | ambiguous | -0.407 | Destabilizing | 0.704 | D | 0.341 | neutral | None | None | None | None | I |
G/M | 0.5628 | ambiguous | 0.6291 | pathogenic | -0.394 | Destabilizing | 0.995 | D | 0.357 | neutral | None | None | None | None | I |
G/N | 0.1957 | likely_benign | 0.2257 | benign | -0.3 | Destabilizing | 0.031 | N | 0.141 | neutral | None | None | None | None | I |
G/P | 0.7977 | likely_pathogenic | 0.87 | pathogenic | -0.296 | Destabilizing | 0.828 | D | 0.397 | neutral | None | None | None | None | I |
G/Q | 0.263 | likely_benign | 0.2874 | benign | -0.645 | Destabilizing | 0.704 | D | 0.377 | neutral | None | None | None | None | I |
G/R | 0.2806 | likely_benign | 0.3091 | benign | -0.263 | Destabilizing | 0.642 | D | 0.39 | neutral | N | 0.479858912 | None | None | I |
G/S | 0.101 | likely_benign | 0.115 | benign | -0.326 | Destabilizing | 0.031 | N | 0.114 | neutral | None | None | None | None | I |
G/T | 0.2488 | likely_benign | 0.2991 | benign | -0.46 | Destabilizing | 0.329 | N | 0.287 | neutral | None | None | None | None | I |
G/V | 0.3228 | likely_benign | 0.3907 | ambiguous | -0.296 | Destabilizing | 0.473 | N | 0.342 | neutral | N | 0.462687689 | None | None | I |
G/W | 0.4972 | ambiguous | 0.5225 | ambiguous | -1.206 | Destabilizing | 0.995 | D | 0.379 | neutral | None | None | None | None | I |
G/Y | 0.4975 | ambiguous | 0.5346 | ambiguous | -0.867 | Destabilizing | 0.981 | D | 0.388 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.