Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7570 | 22933;22934;22935 | chr2:178721955;178721954;178721953 | chr2:179586682;179586681;179586680 |
N2AB | 7253 | 21982;21983;21984 | chr2:178721955;178721954;178721953 | chr2:179586682;179586681;179586680 |
N2A | 6326 | 19201;19202;19203 | chr2:178721955;178721954;178721953 | chr2:179586682;179586681;179586680 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.011 | N | 0.53 | 0.163 | 0.0666544352282 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 0 | 0 | 0 |
P/H | rs1444461312 | -2.167 | 0.999 | N | 0.783 | 0.418 | 0.297031009988 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/H | rs1444461312 | -2.167 | 0.999 | N | 0.783 | 0.418 | 0.297031009988 | gnomAD-4.0.0 | 1.59191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
P/T | None | None | 0.811 | N | 0.763 | 0.181 | 0.200317383148 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99627E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0832 | likely_benign | 0.0879 | benign | -1.873 | Destabilizing | 0.011 | N | 0.53 | neutral | N | 0.299092119 | None | None | N |
P/C | 0.5709 | likely_pathogenic | 0.5687 | pathogenic | -1.635 | Destabilizing | 0.997 | D | 0.808 | deleterious | None | None | None | None | N |
P/D | 0.9365 | likely_pathogenic | 0.9346 | pathogenic | -3.087 | Highly Destabilizing | 0.919 | D | 0.769 | deleterious | None | None | None | None | N |
P/E | 0.8369 | likely_pathogenic | 0.841 | pathogenic | -2.902 | Highly Destabilizing | 0.919 | D | 0.763 | deleterious | None | None | None | None | N |
P/F | 0.7224 | likely_pathogenic | 0.7378 | pathogenic | -1.042 | Destabilizing | 0.988 | D | 0.822 | deleterious | None | None | None | None | N |
P/G | 0.5379 | ambiguous | 0.5164 | ambiguous | -2.355 | Highly Destabilizing | 0.851 | D | 0.739 | prob.delet. | None | None | None | None | N |
P/H | 0.5331 | ambiguous | 0.5381 | ambiguous | -2.344 | Highly Destabilizing | 0.999 | D | 0.783 | deleterious | N | 0.359217858 | None | None | N |
P/I | 0.462 | ambiguous | 0.509 | ambiguous | -0.528 | Destabilizing | 0.976 | D | 0.816 | deleterious | None | None | None | None | N |
P/K | 0.8902 | likely_pathogenic | 0.8842 | pathogenic | -1.626 | Destabilizing | 0.919 | D | 0.763 | deleterious | None | None | None | None | N |
P/L | 0.247 | likely_benign | 0.2715 | benign | -0.528 | Destabilizing | 0.896 | D | 0.773 | deleterious | N | 0.401160481 | None | None | N |
P/M | 0.536 | ambiguous | 0.569 | pathogenic | -0.631 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
P/N | 0.7862 | likely_pathogenic | 0.7808 | pathogenic | -1.974 | Destabilizing | 0.976 | D | 0.793 | deleterious | None | None | None | None | N |
P/Q | 0.576 | likely_pathogenic | 0.5847 | pathogenic | -1.824 | Destabilizing | 0.988 | D | 0.803 | deleterious | None | None | None | None | N |
P/R | 0.6965 | likely_pathogenic | 0.6752 | pathogenic | -1.485 | Destabilizing | 0.984 | D | 0.801 | deleterious | N | 0.389194048 | None | None | N |
P/S | 0.2388 | likely_benign | 0.2275 | benign | -2.424 | Highly Destabilizing | 0.251 | N | 0.592 | neutral | N | 0.338167795 | None | None | N |
P/T | 0.1868 | likely_benign | 0.1934 | benign | -2.12 | Highly Destabilizing | 0.811 | D | 0.763 | deleterious | N | 0.378360979 | None | None | N |
P/V | 0.2856 | likely_benign | 0.3251 | benign | -0.952 | Destabilizing | 0.851 | D | 0.763 | deleterious | None | None | None | None | N |
P/W | 0.8765 | likely_pathogenic | 0.8753 | pathogenic | -1.731 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
P/Y | 0.6831 | likely_pathogenic | 0.6721 | pathogenic | -1.372 | Destabilizing | 0.996 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.