Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7580 | 22963;22964;22965 | chr2:178721925;178721924;178721923 | chr2:179586652;179586651;179586650 |
N2AB | 7263 | 22012;22013;22014 | chr2:178721925;178721924;178721923 | chr2:179586652;179586651;179586650 |
N2A | 6336 | 19231;19232;19233 | chr2:178721925;178721924;178721923 | chr2:179586652;179586651;179586650 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1215151938 | None | 0.999 | N | 0.814 | 0.29 | 0.362758974969 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs1215151938 | None | 0.999 | N | 0.814 | 0.29 | 0.362758974969 | gnomAD-4.0.0 | 2.02989E-06 | None | None | None | None | N | None | 1.74685E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.40298E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1412 | likely_benign | 0.1086 | benign | -0.141 | Destabilizing | 0.273 | N | 0.355 | neutral | N | 0.398602965 | None | None | N |
G/C | 0.4851 | ambiguous | 0.3662 | ambiguous | -0.825 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/D | 0.5856 | likely_pathogenic | 0.4972 | ambiguous | -0.381 | Destabilizing | 0.996 | D | 0.776 | deleterious | None | None | None | None | N |
G/E | 0.5055 | ambiguous | 0.4049 | ambiguous | -0.541 | Destabilizing | 0.998 | D | 0.785 | deleterious | N | 0.308114247 | None | None | N |
G/F | 0.7244 | likely_pathogenic | 0.6577 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/H | 0.7126 | likely_pathogenic | 0.6202 | pathogenic | -0.294 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/I | 0.3322 | likely_benign | 0.2412 | benign | -0.353 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
G/K | 0.7877 | likely_pathogenic | 0.708 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
G/L | 0.513 | ambiguous | 0.4004 | ambiguous | -0.353 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
G/M | 0.4853 | ambiguous | 0.3828 | ambiguous | -0.468 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/N | 0.4168 | ambiguous | 0.3255 | benign | -0.243 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
G/P | 0.8808 | likely_pathogenic | 0.8229 | pathogenic | -0.254 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
G/Q | 0.5712 | likely_pathogenic | 0.4711 | ambiguous | -0.502 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
G/R | 0.6857 | likely_pathogenic | 0.5912 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.814 | deleterious | N | 0.37074436 | None | None | N |
G/S | 0.1369 | likely_benign | 0.1066 | benign | -0.404 | Destabilizing | 0.592 | D | 0.305 | neutral | None | None | None | None | N |
G/T | 0.2075 | likely_benign | 0.1522 | benign | -0.492 | Destabilizing | 0.997 | D | 0.694 | prob.neutral | None | None | None | None | N |
G/V | 0.2212 | likely_benign | 0.1475 | benign | -0.254 | Destabilizing | 0.998 | D | 0.787 | deleterious | N | 0.444068683 | None | None | N |
G/W | 0.5805 | likely_pathogenic | 0.5132 | ambiguous | -1.048 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
G/Y | 0.6227 | likely_pathogenic | 0.5364 | ambiguous | -0.702 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.