Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7589 | 22990;22991;22992 | chr2:178721898;178721897;178721896 | chr2:179586625;179586624;179586623 |
N2AB | 7272 | 22039;22040;22041 | chr2:178721898;178721897;178721896 | chr2:179586625;179586624;179586623 |
N2A | 6345 | 19258;19259;19260 | chr2:178721898;178721897;178721896 | chr2:179586625;179586624;179586623 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.976 | N | 0.349 | 0.407 | 0.584736501517 | gnomAD-4.0.0 | 1.5928E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86103E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9342 | likely_pathogenic | 0.9234 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
A/D | 0.9977 | likely_pathogenic | 0.997 | pathogenic | -2.913 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/E | 0.9944 | likely_pathogenic | 0.9933 | pathogenic | -2.729 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.65690766 | None | None | N |
A/F | 0.9536 | likely_pathogenic | 0.9453 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/G | 0.4912 | ambiguous | 0.4881 | ambiguous | -1.81 | Destabilizing | 0.998 | D | 0.626 | neutral | D | 0.603307986 | None | None | N |
A/H | 0.9978 | likely_pathogenic | 0.9972 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
A/I | 0.6466 | likely_pathogenic | 0.6341 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/K | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/L | 0.666 | likely_pathogenic | 0.6925 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
A/M | 0.8181 | likely_pathogenic | 0.8178 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/N | 0.9934 | likely_pathogenic | 0.9923 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/P | 0.9963 | likely_pathogenic | 0.9954 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.631369549 | None | None | N |
A/Q | 0.9924 | likely_pathogenic | 0.9915 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/R | 0.9956 | likely_pathogenic | 0.9947 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/S | 0.5603 | ambiguous | 0.5528 | ambiguous | -2.082 | Highly Destabilizing | 0.992 | D | 0.637 | neutral | D | 0.603106182 | None | None | N |
A/T | 0.6564 | likely_pathogenic | 0.6716 | pathogenic | -1.798 | Destabilizing | 0.998 | D | 0.651 | neutral | D | 0.630764136 | None | None | N |
A/V | 0.3032 | likely_benign | 0.3104 | benign | -0.584 | Destabilizing | 0.976 | D | 0.349 | neutral | N | 0.505974128 | None | None | N |
A/W | 0.9985 | likely_pathogenic | 0.9981 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
A/Y | 0.9899 | likely_pathogenic | 0.9874 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.