Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7590 | 22993;22994;22995 | chr2:178721895;178721894;178721893 | chr2:179586622;179586621;179586620 |
N2AB | 7273 | 22042;22043;22044 | chr2:178721895;178721894;178721893 | chr2:179586622;179586621;179586620 |
N2A | 6346 | 19261;19262;19263 | chr2:178721895;178721894;178721893 | chr2:179586622;179586621;179586620 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.099 | D | 0.329 | 0.185 | 0.28058544554 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/N | rs1486219064 | None | 0.379 | N | 0.429 | 0.301 | 0.461323234107 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1486219064 | None | 0.379 | N | 0.429 | 0.301 | 0.461323234107 | gnomAD-4.0.0 | 6.57142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0749 | likely_benign | 0.0749 | benign | -0.758 | Destabilizing | 0.099 | N | 0.329 | neutral | D | 0.536715925 | None | None | N |
T/C | 0.4091 | ambiguous | 0.4431 | ambiguous | -0.572 | Destabilizing | 0.992 | D | 0.457 | neutral | None | None | None | None | N |
T/D | 0.4496 | ambiguous | 0.4322 | ambiguous | -1.169 | Destabilizing | 0.617 | D | 0.442 | neutral | None | None | None | None | N |
T/E | 0.3411 | ambiguous | 0.2932 | benign | -1.132 | Destabilizing | 0.617 | D | 0.401 | neutral | None | None | None | None | N |
T/F | 0.1758 | likely_benign | 0.1798 | benign | -0.68 | Destabilizing | 0.85 | D | 0.547 | neutral | None | None | None | None | N |
T/G | 0.2203 | likely_benign | 0.2308 | benign | -1.059 | Destabilizing | 0.447 | N | 0.506 | neutral | None | None | None | None | N |
T/H | 0.2411 | likely_benign | 0.2378 | benign | -1.374 | Destabilizing | 0.977 | D | 0.537 | neutral | None | None | None | None | N |
T/I | 0.1406 | likely_benign | 0.1335 | benign | -0.033 | Destabilizing | 0.379 | N | 0.439 | neutral | D | 0.537294715 | None | None | N |
T/K | 0.274 | likely_benign | 0.2225 | benign | -0.938 | Destabilizing | 0.447 | N | 0.402 | neutral | None | None | None | None | N |
T/L | 0.1082 | likely_benign | 0.1112 | benign | -0.033 | Destabilizing | 0.25 | N | 0.468 | neutral | None | None | None | None | N |
T/M | 0.0884 | likely_benign | 0.0881 | benign | 0.307 | Stabilizing | 0.127 | N | 0.393 | neutral | None | None | None | None | N |
T/N | 0.1299 | likely_benign | 0.1369 | benign | -1.076 | Destabilizing | 0.379 | N | 0.429 | neutral | N | 0.499712569 | None | None | N |
T/P | 0.7462 | likely_pathogenic | 0.701 | pathogenic | -0.242 | Destabilizing | 0.896 | D | 0.431 | neutral | D | 0.541707977 | None | None | N |
T/Q | 0.2202 | likely_benign | 0.1949 | benign | -1.225 | Destabilizing | 0.85 | D | 0.433 | neutral | None | None | None | None | N |
T/R | 0.1976 | likely_benign | 0.1598 | benign | -0.7 | Destabilizing | 0.85 | D | 0.432 | neutral | None | None | None | None | N |
T/S | 0.0772 | likely_benign | 0.0847 | benign | -1.215 | Destabilizing | 0.007 | N | 0.109 | neutral | N | 0.450001017 | None | None | N |
T/V | 0.1086 | likely_benign | 0.1055 | benign | -0.242 | Destabilizing | 0.005 | N | 0.159 | neutral | None | None | None | None | N |
T/W | 0.4938 | ambiguous | 0.4881 | ambiguous | -0.704 | Destabilizing | 0.992 | D | 0.569 | neutral | None | None | None | None | N |
T/Y | 0.2531 | likely_benign | 0.2603 | benign | -0.441 | Destabilizing | 0.92 | D | 0.558 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.