Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7592 | 22999;23000;23001 | chr2:178721889;178721888;178721887 | chr2:179586616;179586615;179586614 |
N2AB | 7275 | 22048;22049;22050 | chr2:178721889;178721888;178721887 | chr2:179586616;179586615;179586614 |
N2A | 6348 | 19267;19268;19269 | chr2:178721889;178721888;178721887 | chr2:179586616;179586615;179586614 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.046 | N | 0.345 | 0.059 | 0.17258766438 | gnomAD-4.0.0 | 6.84583E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1815 | likely_benign | 0.1817 | benign | -0.087 | Destabilizing | 0.939 | D | 0.447 | neutral | N | 0.396395819 | None | None | I |
D/C | 0.7747 | likely_pathogenic | 0.7679 | pathogenic | 0.12 | Stabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
D/E | 0.115 | likely_benign | 0.1172 | benign | -0.312 | Destabilizing | 0.046 | N | 0.345 | neutral | N | 0.423675634 | None | None | I |
D/F | 0.6599 | likely_pathogenic | 0.6696 | pathogenic | -0.212 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
D/G | 0.2389 | likely_benign | 0.2316 | benign | -0.228 | Destabilizing | 0.939 | D | 0.441 | neutral | N | 0.457425635 | None | None | I |
D/H | 0.3629 | ambiguous | 0.3669 | ambiguous | 0.103 | Stabilizing | 0.998 | D | 0.469 | neutral | N | 0.492962361 | None | None | I |
D/I | 0.374 | ambiguous | 0.3803 | ambiguous | 0.218 | Stabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | I |
D/K | 0.4434 | ambiguous | 0.4463 | ambiguous | 0.494 | Stabilizing | 0.386 | N | 0.417 | neutral | None | None | None | None | I |
D/L | 0.4357 | ambiguous | 0.4479 | ambiguous | 0.218 | Stabilizing | 0.986 | D | 0.584 | neutral | None | None | None | None | I |
D/M | 0.6189 | likely_pathogenic | 0.6306 | pathogenic | 0.24 | Stabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
D/N | 0.1369 | likely_benign | 0.1339 | benign | 0.278 | Stabilizing | 0.939 | D | 0.46 | neutral | N | 0.476011396 | None | None | I |
D/P | 0.7289 | likely_pathogenic | 0.7504 | pathogenic | 0.137 | Stabilizing | 0.993 | D | 0.463 | neutral | None | None | None | None | I |
D/Q | 0.3649 | ambiguous | 0.3796 | ambiguous | 0.276 | Stabilizing | 0.973 | D | 0.458 | neutral | None | None | None | None | I |
D/R | 0.4679 | ambiguous | 0.4757 | ambiguous | 0.61 | Stabilizing | 0.973 | D | 0.47 | neutral | None | None | None | None | I |
D/S | 0.1489 | likely_benign | 0.1484 | benign | 0.199 | Stabilizing | 0.953 | D | 0.443 | neutral | None | None | None | None | I |
D/T | 0.2636 | likely_benign | 0.2667 | benign | 0.306 | Stabilizing | 0.986 | D | 0.419 | neutral | None | None | None | None | I |
D/V | 0.2174 | likely_benign | 0.2214 | benign | 0.137 | Stabilizing | 0.991 | D | 0.584 | neutral | N | 0.446363279 | None | None | I |
D/W | 0.9143 | likely_pathogenic | 0.9143 | pathogenic | -0.16 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | I |
D/Y | 0.3253 | likely_benign | 0.3271 | benign | 0.013 | Stabilizing | 0.999 | D | 0.607 | neutral | N | 0.500947126 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.