Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7593 | 23002;23003;23004 | chr2:178721886;178721885;178721884 | chr2:179586613;179586612;179586611 |
N2AB | 7276 | 22051;22052;22053 | chr2:178721886;178721885;178721884 | chr2:179586613;179586612;179586611 |
N2A | 6349 | 19270;19271;19272 | chr2:178721886;178721885;178721884 | chr2:179586613;179586612;179586611 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs758335261 | 0.002 | 0.011 | N | 0.248 | 0.125 | 0.306695030598 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/A | rs758335261 | 0.002 | 0.011 | N | 0.248 | 0.125 | 0.306695030598 | gnomAD-4.0.0 | 1.59349E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86213E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0974 | likely_benign | 0.1006 | benign | -0.282 | Destabilizing | 0.011 | N | 0.248 | neutral | N | 0.417213808 | None | None | I |
V/C | 0.8098 | likely_pathogenic | 0.8036 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | I |
V/D | 0.4193 | ambiguous | 0.4412 | ambiguous | -0.387 | Destabilizing | 0.984 | D | 0.628 | neutral | N | 0.498231312 | None | None | I |
V/E | 0.3783 | ambiguous | 0.3914 | ambiguous | -0.518 | Destabilizing | 0.976 | D | 0.555 | neutral | None | None | None | None | I |
V/F | 0.1523 | likely_benign | 0.1644 | benign | -0.713 | Destabilizing | 0.984 | D | 0.528 | neutral | N | 0.476147469 | None | None | I |
V/G | 0.255 | likely_benign | 0.2619 | benign | -0.341 | Destabilizing | 0.811 | D | 0.603 | neutral | N | 0.514108424 | None | None | I |
V/H | 0.6475 | likely_pathogenic | 0.6626 | pathogenic | 0.031 | Stabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | I |
V/I | 0.0861 | likely_benign | 0.0919 | benign | -0.277 | Destabilizing | 0.896 | D | 0.469 | neutral | N | 0.498408253 | None | None | I |
V/K | 0.585 | likely_pathogenic | 0.6046 | pathogenic | -0.312 | Destabilizing | 0.976 | D | 0.559 | neutral | None | None | None | None | I |
V/L | 0.2666 | likely_benign | 0.3091 | benign | -0.277 | Destabilizing | 0.78 | D | 0.515 | neutral | N | 0.442322897 | None | None | I |
V/M | 0.1508 | likely_benign | 0.1642 | benign | -0.428 | Destabilizing | 0.996 | D | 0.497 | neutral | None | None | None | None | I |
V/N | 0.3598 | ambiguous | 0.3723 | ambiguous | -0.07 | Destabilizing | 0.988 | D | 0.644 | neutral | None | None | None | None | I |
V/P | 0.9295 | likely_pathogenic | 0.9385 | pathogenic | -0.249 | Destabilizing | 0.988 | D | 0.611 | neutral | None | None | None | None | I |
V/Q | 0.4484 | ambiguous | 0.4563 | ambiguous | -0.324 | Destabilizing | 0.988 | D | 0.621 | neutral | None | None | None | None | I |
V/R | 0.4654 | ambiguous | 0.4792 | ambiguous | 0.178 | Stabilizing | 0.988 | D | 0.645 | neutral | None | None | None | None | I |
V/S | 0.1738 | likely_benign | 0.1809 | benign | -0.359 | Destabilizing | 0.851 | D | 0.561 | neutral | None | None | None | None | I |
V/T | 0.1544 | likely_benign | 0.1645 | benign | -0.4 | Destabilizing | 0.132 | N | 0.389 | neutral | None | None | None | None | I |
V/W | 0.8252 | likely_pathogenic | 0.8319 | pathogenic | -0.774 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/Y | 0.603 | likely_pathogenic | 0.609 | pathogenic | -0.479 | Destabilizing | 0.996 | D | 0.539 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.