Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7595 | 23008;23009;23010 | chr2:178721880;178721879;178721878 | chr2:179586607;179586606;179586605 |
N2AB | 7278 | 22057;22058;22059 | chr2:178721880;178721879;178721878 | chr2:179586607;179586606;179586605 |
N2A | 6351 | 19276;19277;19278 | chr2:178721880;178721879;178721878 | chr2:179586607;179586606;179586605 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.998 | N | 0.697 | 0.351 | 0.259272394797 | gnomAD-4.0.0 | 1.59404E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86321E-06 | 0 | 0 |
K/R | rs2078423913 | None | 0.996 | N | 0.579 | 0.283 | 0.32980341726 | gnomAD-4.0.0 | 1.59412E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86333E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4927 | ambiguous | 0.4248 | ambiguous | -0.071 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
K/C | 0.8509 | likely_pathogenic | 0.8282 | pathogenic | -0.026 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/D | 0.7275 | likely_pathogenic | 0.6832 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
K/E | 0.2163 | likely_benign | 0.1696 | benign | 0.056 | Stabilizing | 0.995 | D | 0.596 | neutral | N | 0.394838381 | None | None | I |
K/F | 0.8682 | likely_pathogenic | 0.8226 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
K/G | 0.5991 | likely_pathogenic | 0.5452 | ambiguous | -0.335 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | I |
K/H | 0.3953 | ambiguous | 0.3669 | ambiguous | -0.673 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/I | 0.5482 | ambiguous | 0.461 | ambiguous | 0.565 | Stabilizing | 0.992 | D | 0.684 | prob.neutral | N | 0.490138273 | None | None | I |
K/L | 0.5645 | likely_pathogenic | 0.5007 | ambiguous | 0.565 | Stabilizing | 0.994 | D | 0.586 | neutral | None | None | None | None | I |
K/M | 0.3385 | likely_benign | 0.276 | benign | 0.43 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
K/N | 0.533 | ambiguous | 0.4781 | ambiguous | 0.273 | Stabilizing | 1.0 | D | 0.664 | neutral | N | 0.482980227 | None | None | I |
K/P | 0.9404 | likely_pathogenic | 0.9353 | pathogenic | 0.383 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/Q | 0.1559 | likely_benign | 0.1358 | benign | 0.087 | Stabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.426740156 | None | None | I |
K/R | 0.0862 | likely_benign | 0.0867 | benign | -0.104 | Destabilizing | 0.996 | D | 0.579 | neutral | N | 0.476707616 | None | None | I |
K/S | 0.4679 | ambiguous | 0.4132 | ambiguous | -0.247 | Destabilizing | 0.969 | D | 0.352 | neutral | None | None | None | None | I |
K/T | 0.2244 | likely_benign | 0.1881 | benign | -0.056 | Destabilizing | 0.989 | D | 0.64 | neutral | N | 0.4291271 | None | None | I |
K/V | 0.4877 | ambiguous | 0.4088 | ambiguous | 0.383 | Stabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | I |
K/W | 0.8284 | likely_pathogenic | 0.7834 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/Y | 0.754 | likely_pathogenic | 0.709 | pathogenic | 0.281 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.