Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7598 | 23017;23018;23019 | chr2:178721871;178721870;178721869 | chr2:179586598;179586597;179586596 |
N2AB | 7281 | 22066;22067;22068 | chr2:178721871;178721870;178721869 | chr2:179586598;179586597;179586596 |
N2A | 6354 | 19285;19286;19287 | chr2:178721871;178721870;178721869 | chr2:179586598;179586597;179586596 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs1316768329 | -2.287 | 1.0 | N | 0.817 | 0.451 | 0.68100823904 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/S | rs1316768329 | -2.287 | 1.0 | N | 0.817 | 0.451 | 0.68100823904 | gnomAD-4.0.0 | 1.59652E-06 | None | None | None | None | N | None | 0 | 2.29137E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5419 | ambiguous | 0.5554 | ambiguous | -2.217 | Highly Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
C/D | 0.9466 | likely_pathogenic | 0.9389 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
C/E | 0.9837 | likely_pathogenic | 0.9817 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
C/F | 0.6746 | likely_pathogenic | 0.6752 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.925 | deleterious | N | 0.486453252 | None | None | N |
C/G | 0.3996 | ambiguous | 0.413 | ambiguous | -2.555 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.520436964 | None | None | N |
C/H | 0.9329 | likely_pathogenic | 0.9327 | pathogenic | -2.488 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
C/I | 0.813 | likely_pathogenic | 0.8491 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
C/K | 0.9923 | likely_pathogenic | 0.9917 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
C/L | 0.8304 | likely_pathogenic | 0.8509 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
C/M | 0.8887 | likely_pathogenic | 0.8973 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
C/N | 0.9061 | likely_pathogenic | 0.8986 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.93 | deleterious | None | None | None | None | N |
C/P | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
C/Q | 0.9573 | likely_pathogenic | 0.9553 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
C/R | 0.9396 | likely_pathogenic | 0.9385 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.929 | deleterious | N | 0.511297405 | None | None | N |
C/S | 0.409 | ambiguous | 0.43 | ambiguous | -2.309 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.431623113 | None | None | N |
C/T | 0.5616 | ambiguous | 0.5914 | pathogenic | -1.988 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
C/V | 0.6575 | likely_pathogenic | 0.7042 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
C/W | 0.9403 | likely_pathogenic | 0.9314 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.536579852 | None | None | N |
C/Y | 0.8636 | likely_pathogenic | 0.8585 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.924 | deleterious | N | 0.486706741 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.