Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7599 | 23020;23021;23022 | chr2:178721868;178721867;178721866 | chr2:179586595;179586594;179586593 |
N2AB | 7282 | 22069;22070;22071 | chr2:178721868;178721867;178721866 | chr2:179586595;179586594;179586593 |
N2A | 6355 | 19288;19289;19290 | chr2:178721868;178721867;178721866 | chr2:179586595;179586594;179586593 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.997 | N | 0.651 | 0.445 | 0.72449871023 | gnomAD-4.0.0 | 1.59696E-06 | None | None | None | None | N | None | 0 | 2.29179E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/P | None | None | 1.0 | N | 0.685 | 0.531 | 0.525561869914 | gnomAD-4.0.0 | 1.5965E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0884 | likely_benign | 0.0857 | benign | -0.544 | Destabilizing | 0.744 | D | 0.483 | neutral | N | 0.489442219 | None | None | N |
S/C | 0.1918 | likely_benign | 0.1757 | benign | -0.285 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/D | 0.4999 | ambiguous | 0.4826 | ambiguous | -0.458 | Destabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | N |
S/E | 0.5601 | ambiguous | 0.5397 | ambiguous | -0.491 | Destabilizing | 0.997 | D | 0.553 | neutral | None | None | None | None | N |
S/F | 0.15 | likely_benign | 0.1446 | benign | -0.791 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
S/G | 0.1294 | likely_benign | 0.1316 | benign | -0.771 | Destabilizing | 0.998 | D | 0.54 | neutral | None | None | None | None | N |
S/H | 0.3445 | ambiguous | 0.3472 | ambiguous | -1.335 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
S/I | 0.1452 | likely_benign | 0.1388 | benign | -0.057 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/K | 0.6427 | likely_pathogenic | 0.6335 | pathogenic | -0.819 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
S/L | 0.0922 | likely_benign | 0.0873 | benign | -0.057 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.512283416 | None | None | N |
S/M | 0.1938 | likely_benign | 0.1868 | benign | 0.318 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/N | 0.1574 | likely_benign | 0.1588 | benign | -0.643 | Destabilizing | 0.968 | D | 0.56 | neutral | None | None | None | None | N |
S/P | 0.5015 | ambiguous | 0.4867 | ambiguous | -0.186 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.512536905 | None | None | N |
S/Q | 0.4844 | ambiguous | 0.4939 | ambiguous | -0.842 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
S/R | 0.5102 | ambiguous | 0.5143 | ambiguous | -0.643 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/T | 0.0757 | likely_benign | 0.0735 | benign | -0.629 | Destabilizing | 0.059 | N | 0.295 | neutral | N | 0.49090349 | None | None | N |
S/V | 0.1529 | likely_benign | 0.145 | benign | -0.186 | Destabilizing | 0.994 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/W | 0.3323 | likely_benign | 0.3179 | benign | -0.807 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/Y | 0.1862 | likely_benign | 0.1745 | benign | -0.554 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.