Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7602 | 23029;23030;23031 | chr2:178721859;178721858;178721857 | chr2:179586586;179586585;179586584 |
N2AB | 7285 | 22078;22079;22080 | chr2:178721859;178721858;178721857 | chr2:179586586;179586585;179586584 |
N2A | 6358 | 19297;19298;19299 | chr2:178721859;178721858;178721857 | chr2:179586586;179586585;179586584 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs754142672 | -1.765 | 0.998 | N | 0.739 | 0.479 | 0.646549884328 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
L/F | rs754142672 | -1.765 | 0.998 | N | 0.739 | 0.479 | 0.646549884328 | gnomAD-4.0.0 | 3.21054E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89172E-05 | 0 | 2.88033E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9563 | likely_pathogenic | 0.9598 | pathogenic | -2.841 | Highly Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/C | 0.9659 | likely_pathogenic | 0.9606 | pathogenic | -2.437 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.138 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -2.844 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.8421 | likely_pathogenic | 0.8527 | pathogenic | -1.786 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | N | 0.509603027 | None | None | N |
L/G | 0.9916 | likely_pathogenic | 0.9922 | pathogenic | -3.452 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/H | 0.9958 | likely_pathogenic | 0.9966 | pathogenic | -2.994 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.556460281 | None | None | N |
L/I | 0.2283 | likely_benign | 0.2586 | benign | -1.024 | Destabilizing | 0.753 | D | 0.613 | neutral | N | 0.493305517 | None | None | N |
L/K | 0.9968 | likely_pathogenic | 0.9975 | pathogenic | -2.086 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.5106 | ambiguous | 0.5209 | ambiguous | -1.248 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/P | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.617 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.556460281 | None | None | N |
L/Q | 0.992 | likely_pathogenic | 0.994 | pathogenic | -2.376 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/R | 0.9917 | likely_pathogenic | 0.9938 | pathogenic | -2.005 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.556460281 | None | None | N |
L/S | 0.996 | likely_pathogenic | 0.9967 | pathogenic | -3.393 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/T | 0.9785 | likely_pathogenic | 0.9805 | pathogenic | -2.927 | Highly Destabilizing | 0.719 | D | 0.547 | neutral | None | None | None | None | N |
L/V | 0.242 | likely_benign | 0.2649 | benign | -1.617 | Destabilizing | 0.097 | N | 0.342 | neutral | N | 0.499493183 | None | None | N |
L/W | 0.99 | likely_pathogenic | 0.9923 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/Y | 0.9885 | likely_pathogenic | 0.9898 | pathogenic | -1.904 | Destabilizing | 0.996 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.