Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC760223029;23030;23031 chr2:178721859;178721858;178721857chr2:179586586;179586585;179586584
N2AB728522078;22079;22080 chr2:178721859;178721858;178721857chr2:179586586;179586585;179586584
N2A635819297;19298;19299 chr2:178721859;178721858;178721857chr2:179586586;179586585;179586584
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-60
  • Domain position: 88
  • Structural Position: 174
  • Q(SASA): 0.0912
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs754142672 -1.765 0.998 N 0.739 0.479 0.646549884328 gnomAD-2.1.1 4.08E-06 None None None None N None 0 0 None 0 0 None 0 None 0 9.01E-06 0
L/F rs754142672 -1.765 0.998 N 0.739 0.479 0.646549884328 gnomAD-4.0.0 3.21054E-06 None None None None N None 0 0 None 0 0 None 1.89172E-05 0 2.88033E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9563 likely_pathogenic 0.9598 pathogenic -2.841 Highly Destabilizing 0.996 D 0.701 prob.neutral None None None None N
L/C 0.9659 likely_pathogenic 0.9606 pathogenic -2.437 Highly Destabilizing 1.0 D 0.767 deleterious None None None None N
L/D 0.9997 likely_pathogenic 0.9997 pathogenic -3.138 Highly Destabilizing 1.0 D 0.85 deleterious None None None None N
L/E 0.9976 likely_pathogenic 0.9981 pathogenic -2.844 Highly Destabilizing 1.0 D 0.857 deleterious None None None None N
L/F 0.8421 likely_pathogenic 0.8527 pathogenic -1.786 Destabilizing 0.998 D 0.739 prob.delet. N 0.509603027 None None N
L/G 0.9916 likely_pathogenic 0.9922 pathogenic -3.452 Highly Destabilizing 1.0 D 0.853 deleterious None None None None N
L/H 0.9958 likely_pathogenic 0.9966 pathogenic -2.994 Highly Destabilizing 1.0 D 0.849 deleterious D 0.556460281 None None N
L/I 0.2283 likely_benign 0.2586 benign -1.024 Destabilizing 0.753 D 0.613 neutral N 0.493305517 None None N
L/K 0.9968 likely_pathogenic 0.9975 pathogenic -2.086 Highly Destabilizing 0.999 D 0.827 deleterious None None None None N
L/M 0.5106 ambiguous 0.5209 ambiguous -1.248 Destabilizing 0.996 D 0.709 prob.delet. None None None None N
L/N 0.9976 likely_pathogenic 0.9979 pathogenic -2.647 Highly Destabilizing 1.0 D 0.847 deleterious None None None None N
L/P 0.9977 likely_pathogenic 0.998 pathogenic -1.617 Destabilizing 1.0 D 0.848 deleterious D 0.556460281 None None N
L/Q 0.992 likely_pathogenic 0.994 pathogenic -2.376 Highly Destabilizing 1.0 D 0.813 deleterious None None None None N
L/R 0.9917 likely_pathogenic 0.9938 pathogenic -2.005 Highly Destabilizing 1.0 D 0.811 deleterious D 0.556460281 None None N
L/S 0.996 likely_pathogenic 0.9967 pathogenic -3.393 Highly Destabilizing 1.0 D 0.823 deleterious None None None None N
L/T 0.9785 likely_pathogenic 0.9805 pathogenic -2.927 Highly Destabilizing 0.719 D 0.547 neutral None None None None N
L/V 0.242 likely_benign 0.2649 benign -1.617 Destabilizing 0.097 N 0.342 neutral N 0.499493183 None None N
L/W 0.99 likely_pathogenic 0.9923 pathogenic -2.127 Highly Destabilizing 1.0 D 0.826 deleterious None None None None N
L/Y 0.9885 likely_pathogenic 0.9898 pathogenic -1.904 Destabilizing 0.996 D 0.746 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.