Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7603 | 23032;23033;23034 | chr2:178721856;178721855;178721854 | chr2:179586583;179586582;179586581 |
N2AB | 7286 | 22081;22082;22083 | chr2:178721856;178721855;178721854 | chr2:179586583;179586582;179586581 |
N2A | 6359 | 19300;19301;19302 | chr2:178721856;178721855;178721854 | chr2:179586583;179586582;179586581 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.001 | D | 0.081 | 0.106 | 0.233785782151 | gnomAD-4.0.0 | 6.92636E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06595E-07 | 0 | 0 |
S/I | rs777949804 | -0.05 | 0.213 | N | 0.519 | 0.252 | 0.41518383557 | gnomAD-2.1.1 | 4.19E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.18E-06 | 0 |
S/I | rs777949804 | -0.05 | 0.213 | N | 0.519 | 0.252 | 0.41518383557 | gnomAD-4.0.0 | 4.85413E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.44414E-06 | 1.22318E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0787 | likely_benign | 0.0743 | benign | -0.675 | Destabilizing | 0.061 | N | 0.257 | neutral | None | None | None | None | N |
S/C | 0.1536 | likely_benign | 0.1542 | benign | -0.513 | Destabilizing | 0.978 | D | 0.439 | neutral | N | 0.493494371 | None | None | N |
S/D | 0.2835 | likely_benign | 0.2643 | benign | -0.14 | Destabilizing | 0.129 | N | 0.299 | neutral | None | None | None | None | N |
S/E | 0.3999 | ambiguous | 0.3798 | ambiguous | -0.181 | Destabilizing | 0.01 | N | 0.137 | neutral | None | None | None | None | N |
S/F | 0.1336 | likely_benign | 0.1151 | benign | -1.018 | Destabilizing | 0.002 | N | 0.355 | neutral | None | None | None | None | N |
S/G | 0.0835 | likely_benign | 0.0897 | benign | -0.871 | Destabilizing | 0.001 | N | 0.081 | neutral | D | 0.522477191 | None | None | N |
S/H | 0.2047 | likely_benign | 0.2031 | benign | -1.389 | Destabilizing | 0.836 | D | 0.465 | neutral | None | None | None | None | N |
S/I | 0.095 | likely_benign | 0.0944 | benign | -0.272 | Destabilizing | 0.213 | N | 0.519 | neutral | N | 0.434684848 | None | None | N |
S/K | 0.4238 | ambiguous | 0.4354 | ambiguous | -0.656 | Destabilizing | 0.418 | N | 0.287 | neutral | None | None | None | None | N |
S/L | 0.0801 | likely_benign | 0.0771 | benign | -0.272 | Destabilizing | 0.129 | N | 0.474 | neutral | None | None | None | None | N |
S/M | 0.1444 | likely_benign | 0.1426 | benign | 0.061 | Stabilizing | 0.836 | D | 0.471 | neutral | None | None | None | None | N |
S/N | 0.0831 | likely_benign | 0.0814 | benign | -0.521 | Destabilizing | 0.002 | N | 0.15 | neutral | N | 0.450134303 | None | None | N |
S/P | 0.7871 | likely_pathogenic | 0.7409 | pathogenic | -0.375 | Destabilizing | 0.94 | D | 0.493 | neutral | None | None | None | None | N |
S/Q | 0.3275 | likely_benign | 0.3322 | benign | -0.763 | Destabilizing | 0.418 | N | 0.401 | neutral | None | None | None | None | N |
S/R | 0.3175 | likely_benign | 0.326 | benign | -0.49 | Destabilizing | 0.351 | N | 0.497 | neutral | N | 0.443034973 | None | None | N |
S/T | 0.0642 | likely_benign | 0.0644 | benign | -0.601 | Destabilizing | 0.007 | N | 0.109 | neutral | N | 0.398395974 | None | None | N |
S/V | 0.1277 | likely_benign | 0.1255 | benign | -0.375 | Destabilizing | 0.01 | N | 0.301 | neutral | None | None | None | None | N |
S/W | 0.2581 | likely_benign | 0.2419 | benign | -0.954 | Destabilizing | 0.983 | D | 0.502 | neutral | None | None | None | None | N |
S/Y | 0.1449 | likely_benign | 0.13 | benign | -0.7 | Destabilizing | 0.557 | D | 0.52 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.