Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7611 | 23056;23057;23058 | chr2:178721188;178721187;178721186 | chr2:179585915;179585914;179585913 |
N2AB | 7294 | 22105;22106;22107 | chr2:178721188;178721187;178721186 | chr2:179585915;179585914;179585913 |
N2A | 6367 | 19324;19325;19326 | chr2:178721188;178721187;178721186 | chr2:179585915;179585914;179585913 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2078303189 | None | None | N | 0.113 | 0.119 | 0.204665344411 | gnomAD-4.0.0 | 1.63227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94507E-06 | 0 | 0 |
V/L | None | None | 0.02 | N | 0.345 | 0.108 | 0.283371740733 | gnomAD-4.0.0 | 1.63227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94507E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4336 | ambiguous | 0.2909 | benign | -0.908 | Destabilizing | 0.055 | N | 0.411 | neutral | N | 0.46679493 | None | None | N |
V/C | 0.8774 | likely_pathogenic | 0.819 | pathogenic | -0.726 | Destabilizing | 0.909 | D | 0.517 | neutral | None | None | None | None | N |
V/D | 0.7694 | likely_pathogenic | 0.6321 | pathogenic | -0.66 | Destabilizing | 0.497 | N | 0.623 | neutral | N | 0.454984552 | None | None | N |
V/E | 0.6324 | likely_pathogenic | 0.5035 | ambiguous | -0.71 | Destabilizing | 0.567 | D | 0.547 | neutral | None | None | None | None | N |
V/F | 0.2491 | likely_benign | 0.2101 | benign | -0.745 | Destabilizing | 0.497 | N | 0.51 | neutral | N | 0.482924175 | None | None | N |
V/G | 0.4595 | ambiguous | 0.3345 | benign | -1.139 | Destabilizing | 0.497 | N | 0.549 | neutral | N | 0.502131294 | None | None | N |
V/H | 0.7487 | likely_pathogenic | 0.662 | pathogenic | -0.539 | Destabilizing | 0.968 | D | 0.643 | neutral | None | None | None | None | N |
V/I | 0.0707 | likely_benign | 0.0648 | benign | -0.411 | Destabilizing | None | N | 0.113 | neutral | N | 0.449223786 | None | None | N |
V/K | 0.6876 | likely_pathogenic | 0.5653 | pathogenic | -0.862 | Destabilizing | 0.567 | D | 0.556 | neutral | None | None | None | None | N |
V/L | 0.2107 | likely_benign | 0.1498 | benign | -0.411 | Destabilizing | 0.02 | N | 0.345 | neutral | N | 0.489896973 | None | None | N |
V/M | 0.2124 | likely_benign | 0.1603 | benign | -0.43 | Destabilizing | 0.567 | D | 0.481 | neutral | None | None | None | None | N |
V/N | 0.5211 | ambiguous | 0.3736 | ambiguous | -0.634 | Destabilizing | 0.567 | D | 0.63 | neutral | None | None | None | None | N |
V/P | 0.8976 | likely_pathogenic | 0.7914 | pathogenic | -0.541 | Destabilizing | 0.726 | D | 0.607 | neutral | None | None | None | None | N |
V/Q | 0.5307 | ambiguous | 0.4146 | ambiguous | -0.83 | Destabilizing | 0.726 | D | 0.597 | neutral | None | None | None | None | N |
V/R | 0.6068 | likely_pathogenic | 0.4842 | ambiguous | -0.29 | Destabilizing | 0.567 | D | 0.62 | neutral | None | None | None | None | N |
V/S | 0.3928 | ambiguous | 0.2869 | benign | -1.072 | Destabilizing | 0.157 | N | 0.491 | neutral | None | None | None | None | N |
V/T | 0.2955 | likely_benign | 0.2172 | benign | -1.018 | Destabilizing | 0.001 | N | 0.175 | neutral | None | None | None | None | N |
V/W | 0.8695 | likely_pathogenic | 0.826 | pathogenic | -0.865 | Destabilizing | 0.968 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/Y | 0.686 | likely_pathogenic | 0.6099 | pathogenic | -0.59 | Destabilizing | 0.726 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.