Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7614 | 23065;23066;23067 | chr2:178721179;178721178;178721177 | chr2:179585906;179585905;179585904 |
N2AB | 7297 | 22114;22115;22116 | chr2:178721179;178721178;178721177 | chr2:179585906;179585905;179585904 |
N2A | 6370 | 19333;19334;19335 | chr2:178721179;178721178;178721177 | chr2:179585906;179585905;179585904 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.307 | N | 0.401 | 0.283 | 0.662284845153 | gnomAD-4.0.0 | 2.7597E-06 | None | None | None | None | N | None | 1.21087E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6509 | likely_pathogenic | 0.5684 | pathogenic | -2.241 | Highly Destabilizing | 0.168 | N | 0.269 | neutral | None | None | None | None | N |
L/C | 0.9251 | likely_pathogenic | 0.8865 | pathogenic | -1.426 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | N |
L/D | 0.9923 | likely_pathogenic | 0.9879 | pathogenic | -1.796 | Destabilizing | 0.981 | D | 0.655 | neutral | None | None | None | None | N |
L/E | 0.9562 | likely_pathogenic | 0.9402 | pathogenic | -1.725 | Destabilizing | 0.917 | D | 0.629 | neutral | None | None | None | None | N |
L/F | 0.6796 | likely_pathogenic | 0.627 | pathogenic | -1.531 | Destabilizing | 0.941 | D | 0.559 | neutral | N | 0.477055734 | None | None | N |
L/G | 0.9277 | likely_pathogenic | 0.9013 | pathogenic | -2.661 | Highly Destabilizing | 0.938 | D | 0.557 | neutral | None | None | None | None | N |
L/H | 0.9544 | likely_pathogenic | 0.9313 | pathogenic | -1.905 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | N |
L/I | 0.2111 | likely_benign | 0.174 | benign | -1.103 | Destabilizing | 0.143 | N | 0.457 | neutral | N | 0.475218855 | None | None | N |
L/K | 0.9534 | likely_pathogenic | 0.9363 | pathogenic | -1.567 | Destabilizing | 0.307 | N | 0.583 | neutral | None | None | None | None | N |
L/M | 0.2338 | likely_benign | 0.1848 | benign | -0.834 | Destabilizing | 0.14 | N | 0.304 | neutral | None | None | None | None | N |
L/N | 0.9515 | likely_pathogenic | 0.9265 | pathogenic | -1.447 | Destabilizing | 0.981 | D | 0.667 | neutral | None | None | None | None | N |
L/P | 0.326 | likely_benign | 0.2535 | benign | -1.455 | Destabilizing | 0.019 | N | 0.393 | neutral | None | None | None | None | N |
L/Q | 0.8526 | likely_pathogenic | 0.7973 | pathogenic | -1.553 | Destabilizing | 0.978 | D | 0.629 | neutral | None | None | None | None | N |
L/R | 0.9218 | likely_pathogenic | 0.8943 | pathogenic | -1.026 | Destabilizing | 0.977 | D | 0.633 | neutral | None | None | None | None | N |
L/S | 0.9239 | likely_pathogenic | 0.8806 | pathogenic | -2.157 | Highly Destabilizing | 0.307 | N | 0.401 | neutral | N | 0.497882241 | None | None | N |
L/T | 0.677 | likely_pathogenic | 0.5805 | pathogenic | -1.956 | Destabilizing | 0.694 | D | 0.475 | neutral | None | None | None | None | N |
L/V | 0.1998 | likely_benign | 0.1629 | benign | -1.455 | Destabilizing | 0.083 | N | 0.419 | neutral | N | 0.475725834 | None | None | N |
L/W | 0.8979 | likely_pathogenic | 0.8717 | pathogenic | -1.674 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
L/Y | 0.9628 | likely_pathogenic | 0.9512 | pathogenic | -1.465 | Destabilizing | 0.833 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.