Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7615 | 23068;23069;23070 | chr2:178721176;178721175;178721174 | chr2:179585903;179585902;179585901 |
N2AB | 7298 | 22117;22118;22119 | chr2:178721176;178721175;178721174 | chr2:179585903;179585902;179585901 |
N2A | 6371 | 19336;19337;19338 | chr2:178721176;178721175;178721174 | chr2:179585903;179585902;179585901 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1422183428 | -0.012 | None | N | 0.12 | 0.068 | 0.136095386433 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1422183428 | -0.012 | None | N | 0.12 | 0.068 | 0.136095386433 | gnomAD-4.0.0 | 1.62079E-06 | None | None | None | None | N | None | 0 | 2.32137E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1472 | likely_benign | 0.1222 | benign | -0.112 | Destabilizing | 0.034 | N | 0.432 | neutral | N | 0.504290422 | None | None | N |
E/C | 0.8679 | likely_pathogenic | 0.8049 | pathogenic | 0.056 | Stabilizing | 0.792 | D | 0.495 | neutral | None | None | None | None | N |
E/D | 0.0933 | likely_benign | 0.0749 | benign | -0.157 | Destabilizing | None | N | 0.12 | neutral | N | 0.487878175 | None | None | N |
E/F | 0.775 | likely_pathogenic | 0.6857 | pathogenic | -0.051 | Destabilizing | 0.381 | N | 0.479 | neutral | None | None | None | None | N |
E/G | 0.1704 | likely_benign | 0.1312 | benign | -0.278 | Destabilizing | 0.105 | N | 0.427 | neutral | N | 0.45703524 | None | None | N |
E/H | 0.5057 | ambiguous | 0.3837 | ambiguous | 0.298 | Stabilizing | None | N | 0.259 | neutral | None | None | None | None | N |
E/I | 0.4344 | ambiguous | 0.3566 | ambiguous | 0.275 | Stabilizing | 0.224 | N | 0.493 | neutral | None | None | None | None | N |
E/K | 0.2456 | likely_benign | 0.1804 | benign | 0.566 | Stabilizing | 0.032 | N | 0.429 | neutral | N | 0.456880478 | None | None | N |
E/L | 0.396 | ambiguous | 0.3098 | benign | 0.275 | Stabilizing | 0.125 | N | 0.482 | neutral | None | None | None | None | N |
E/M | 0.5457 | ambiguous | 0.4663 | ambiguous | 0.232 | Stabilizing | 0.372 | N | 0.46 | neutral | None | None | None | None | N |
E/N | 0.2631 | likely_benign | 0.1855 | benign | 0.259 | Stabilizing | 0.009 | N | 0.354 | neutral | None | None | None | None | N |
E/P | 0.3478 | ambiguous | 0.2942 | benign | 0.166 | Stabilizing | 0.041 | N | 0.448 | neutral | None | None | None | None | N |
E/Q | 0.1725 | likely_benign | 0.143 | benign | 0.3 | Stabilizing | 0.002 | N | 0.235 | neutral | N | 0.474620876 | None | None | N |
E/R | 0.367 | ambiguous | 0.2829 | benign | 0.725 | Stabilizing | 0.08 | N | 0.389 | neutral | None | None | None | None | N |
E/S | 0.202 | likely_benign | 0.1592 | benign | 0.116 | Stabilizing | 0.023 | N | 0.39 | neutral | None | None | None | None | N |
E/T | 0.2546 | likely_benign | 0.2084 | benign | 0.26 | Stabilizing | 0.061 | N | 0.436 | neutral | None | None | None | None | N |
E/V | 0.2341 | likely_benign | 0.1921 | benign | 0.166 | Stabilizing | 0.134 | N | 0.465 | neutral | N | 0.512448546 | None | None | N |
E/W | 0.9044 | likely_pathogenic | 0.8453 | pathogenic | 0.048 | Stabilizing | 0.95 | D | 0.551 | neutral | None | None | None | None | N |
E/Y | 0.6731 | likely_pathogenic | 0.5444 | ambiguous | 0.191 | Stabilizing | 0.448 | N | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.