Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7620 | 23083;23084;23085 | chr2:178721161;178721160;178721159 | chr2:179585888;179585887;179585886 |
N2AB | 7303 | 22132;22133;22134 | chr2:178721161;178721160;178721159 | chr2:179585888;179585887;179585886 |
N2A | 6376 | 19351;19352;19353 | chr2:178721161;178721160;178721159 | chr2:179585888;179585887;179585886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs749462228 | -1.093 | 0.193 | N | 0.4 | 0.248 | 0.346315397577 | gnomAD-4.0.0 | 6.86986E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02939E-07 | 0 | 0 |
A/V | rs2078299503 | None | 0.001 | N | 0.103 | 0.14 | 0.301789629655 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs2078299503 | None | 0.001 | N | 0.103 | 0.14 | 0.301789629655 | gnomAD-4.0.0 | 2.02998E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40988E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4429 | ambiguous | 0.4566 | ambiguous | -0.896 | Destabilizing | 0.944 | D | 0.497 | neutral | None | None | None | None | N |
A/D | 0.6134 | likely_pathogenic | 0.6171 | pathogenic | -1.538 | Destabilizing | 0.002 | N | 0.321 | neutral | None | None | None | None | N |
A/E | 0.4401 | ambiguous | 0.4847 | ambiguous | -1.544 | Destabilizing | 0.193 | N | 0.45 | neutral | N | 0.494562658 | None | None | N |
A/F | 0.3184 | likely_benign | 0.3581 | ambiguous | -0.99 | Destabilizing | 0.69 | D | 0.546 | neutral | None | None | None | None | N |
A/G | 0.1506 | likely_benign | 0.1448 | benign | -1.285 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.501931348 | None | None | N |
A/H | 0.6586 | likely_pathogenic | 0.67 | pathogenic | -1.522 | Destabilizing | 0.981 | D | 0.509 | neutral | None | None | None | None | N |
A/I | 0.1864 | likely_benign | 0.2093 | benign | -0.354 | Destabilizing | 0.098 | N | 0.473 | neutral | None | None | None | None | N |
A/K | 0.648 | likely_pathogenic | 0.669 | pathogenic | -1.471 | Destabilizing | 0.008 | N | 0.283 | neutral | None | None | None | None | N |
A/L | 0.1858 | likely_benign | 0.1944 | benign | -0.354 | Destabilizing | 0.116 | N | 0.437 | neutral | None | None | None | None | N |
A/M | 0.2401 | likely_benign | 0.2611 | benign | -0.243 | Destabilizing | 0.69 | D | 0.53 | neutral | None | None | None | None | N |
A/N | 0.5251 | ambiguous | 0.5093 | ambiguous | -1.191 | Destabilizing | 0.69 | D | 0.549 | neutral | None | None | None | None | N |
A/P | 0.7788 | likely_pathogenic | 0.7361 | pathogenic | -0.527 | Destabilizing | 0.773 | D | 0.571 | neutral | N | 0.513321777 | None | None | N |
A/Q | 0.4853 | ambiguous | 0.5104 | ambiguous | -1.318 | Destabilizing | 0.69 | D | 0.559 | neutral | None | None | None | None | N |
A/R | 0.5662 | likely_pathogenic | 0.577 | pathogenic | -1.101 | Destabilizing | 0.527 | D | 0.573 | neutral | None | None | None | None | N |
A/S | 0.1406 | likely_benign | 0.1278 | benign | -1.509 | Destabilizing | 0.193 | N | 0.4 | neutral | N | 0.499603118 | None | None | N |
A/T | 0.1016 | likely_benign | 0.1024 | benign | -1.425 | Destabilizing | 0.324 | N | 0.408 | neutral | N | 0.461738164 | None | None | N |
A/V | 0.095 | likely_benign | 0.1003 | benign | -0.527 | Destabilizing | 0.001 | N | 0.103 | neutral | N | 0.355122413 | None | None | N |
A/W | 0.7564 | likely_pathogenic | 0.7806 | pathogenic | -1.412 | Destabilizing | 0.981 | D | 0.567 | neutral | None | None | None | None | N |
A/Y | 0.5299 | ambiguous | 0.5726 | pathogenic | -1.009 | Destabilizing | 0.818 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.