Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7622 | 23089;23090;23091 | chr2:178721155;178721154;178721153 | chr2:179585882;179585881;179585880 |
N2AB | 7305 | 22138;22139;22140 | chr2:178721155;178721154;178721153 | chr2:179585882;179585881;179585880 |
N2A | 6378 | 19357;19358;19359 | chr2:178721155;178721154;178721153 | chr2:179585882;179585881;179585880 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1234634855 | None | 0.021 | N | 0.307 | 0.071 | 0.136095386433 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | rs1234634855 | None | 0.021 | N | 0.307 | 0.071 | 0.136095386433 | gnomAD-4.0.0 | 2.57847E-06 | None | None | None | None | N | None | 1.6956E-05 | 1.69976E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1634 | likely_benign | 0.1671 | benign | -0.272 | Destabilizing | 0.003 | N | 0.141 | neutral | None | None | None | None | N |
Q/C | 0.6156 | likely_pathogenic | 0.6293 | pathogenic | 0.259 | Stabilizing | 0.843 | D | 0.353 | neutral | None | None | None | None | N |
Q/D | 0.3875 | ambiguous | 0.4073 | ambiguous | -0.034 | Destabilizing | 0.062 | N | 0.266 | neutral | None | None | None | None | N |
Q/E | 0.067 | likely_benign | 0.0689 | benign | -0.066 | Destabilizing | 0.014 | N | 0.339 | neutral | N | 0.328084087 | None | None | N |
Q/F | 0.6582 | likely_pathogenic | 0.6942 | pathogenic | -0.483 | Destabilizing | 0.3 | N | 0.395 | neutral | None | None | None | None | N |
Q/G | 0.2984 | likely_benign | 0.2946 | benign | -0.462 | Destabilizing | 0.18 | N | 0.381 | neutral | None | None | None | None | N |
Q/H | 0.2278 | likely_benign | 0.2369 | benign | -0.447 | Destabilizing | None | N | 0.274 | neutral | N | 0.486203307 | None | None | N |
Q/I | 0.2978 | likely_benign | 0.3221 | benign | 0.141 | Stabilizing | 0.042 | N | 0.433 | neutral | None | None | None | None | N |
Q/K | 0.0977 | likely_benign | 0.1008 | benign | 0.099 | Stabilizing | None | N | 0.199 | neutral | N | 0.429136516 | None | None | N |
Q/L | 0.1273 | likely_benign | 0.1291 | benign | 0.141 | Stabilizing | None | N | 0.157 | neutral | N | 0.381670643 | None | None | N |
Q/M | 0.3301 | likely_benign | 0.3454 | ambiguous | 0.524 | Stabilizing | 0.235 | N | 0.275 | neutral | None | None | None | None | N |
Q/N | 0.3298 | likely_benign | 0.3445 | ambiguous | -0.185 | Destabilizing | 0.032 | N | 0.315 | neutral | None | None | None | None | N |
Q/P | 0.13 | likely_benign | 0.126 | benign | 0.031 | Stabilizing | 0.261 | N | 0.344 | neutral | N | 0.40910796 | None | None | N |
Q/R | 0.1093 | likely_benign | 0.1105 | benign | 0.241 | Stabilizing | 0.021 | N | 0.307 | neutral | N | 0.436217204 | None | None | N |
Q/S | 0.2601 | likely_benign | 0.2683 | benign | -0.202 | Destabilizing | 0.043 | N | 0.29 | neutral | None | None | None | None | N |
Q/T | 0.2183 | likely_benign | 0.2288 | benign | -0.079 | Destabilizing | 0.008 | N | 0.363 | neutral | None | None | None | None | N |
Q/V | 0.2008 | likely_benign | 0.2145 | benign | 0.031 | Stabilizing | 0.013 | N | 0.383 | neutral | None | None | None | None | N |
Q/W | 0.5123 | ambiguous | 0.5261 | ambiguous | -0.437 | Destabilizing | 0.964 | D | 0.369 | neutral | None | None | None | None | N |
Q/Y | 0.4241 | ambiguous | 0.4465 | ambiguous | -0.185 | Destabilizing | 0.177 | N | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.