Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7624 | 23095;23096;23097 | chr2:178721149;178721148;178721147 | chr2:179585876;179585875;179585874 |
N2AB | 7307 | 22144;22145;22146 | chr2:178721149;178721148;178721147 | chr2:179585876;179585875;179585874 |
N2A | 6380 | 19363;19364;19365 | chr2:178721149;178721148;178721147 | chr2:179585876;179585875;179585874 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2078297140 | None | 0.518 | N | 0.24 | 0.11 | 0.167679373172 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs2078297140 | None | 0.518 | N | 0.24 | 0.11 | 0.167679373172 | gnomAD-4.0.0 | 2.57533E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.821E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.175 | likely_benign | 0.1732 | benign | -0.534 | Destabilizing | 0.107 | N | 0.301 | neutral | N | 0.509872387 | None | None | N |
E/C | 0.8554 | likely_pathogenic | 0.8583 | pathogenic | 0.068 | Stabilizing | 0.984 | D | 0.376 | neutral | None | None | None | None | N |
E/D | 0.0755 | likely_benign | 0.07 | benign | -0.383 | Destabilizing | None | N | 0.131 | neutral | N | 0.419634385 | None | None | N |
E/F | 0.7314 | likely_pathogenic | 0.7416 | pathogenic | -0.412 | Destabilizing | 0.91 | D | 0.365 | neutral | None | None | None | None | N |
E/G | 0.1764 | likely_benign | 0.178 | benign | -0.749 | Destabilizing | 0.003 | N | 0.165 | neutral | N | 0.498057883 | None | None | N |
E/H | 0.439 | ambiguous | 0.4556 | ambiguous | -0.349 | Destabilizing | 0.957 | D | 0.297 | neutral | None | None | None | None | N |
E/I | 0.4224 | ambiguous | 0.4464 | ambiguous | 0.006 | Stabilizing | 0.7 | D | 0.383 | neutral | None | None | None | None | N |
E/K | 0.1735 | likely_benign | 0.1914 | benign | 0.404 | Stabilizing | 0.518 | D | 0.24 | neutral | N | 0.473719586 | None | None | N |
E/L | 0.4445 | ambiguous | 0.4595 | ambiguous | 0.006 | Stabilizing | 0.25 | N | 0.368 | neutral | None | None | None | None | N |
E/M | 0.4738 | ambiguous | 0.4774 | ambiguous | 0.267 | Stabilizing | 0.907 | D | 0.345 | neutral | None | None | None | None | N |
E/N | 0.1875 | likely_benign | 0.1833 | benign | 0.019 | Stabilizing | 0.134 | N | 0.21 | neutral | None | None | None | None | N |
E/P | 0.879 | likely_pathogenic | 0.8948 | pathogenic | -0.154 | Destabilizing | 0.413 | N | 0.311 | neutral | None | None | None | None | N |
E/Q | 0.1365 | likely_benign | 0.1442 | benign | 0.06 | Stabilizing | 0.609 | D | 0.315 | neutral | N | 0.444916832 | None | None | N |
E/R | 0.3143 | likely_benign | 0.3361 | benign | 0.506 | Stabilizing | 0.91 | D | 0.279 | neutral | None | None | None | None | N |
E/S | 0.1731 | likely_benign | 0.1697 | benign | -0.134 | Destabilizing | 0.137 | N | 0.24 | neutral | None | None | None | None | N |
E/T | 0.2371 | likely_benign | 0.2422 | benign | 0.05 | Stabilizing | 0.014 | N | 0.204 | neutral | None | None | None | None | N |
E/V | 0.2476 | likely_benign | 0.262 | benign | -0.154 | Destabilizing | 0.152 | N | 0.369 | neutral | N | 0.474182125 | None | None | N |
E/W | 0.902 | likely_pathogenic | 0.9112 | pathogenic | -0.226 | Destabilizing | 0.997 | D | 0.422 | neutral | None | None | None | None | N |
E/Y | 0.592 | likely_pathogenic | 0.6067 | pathogenic | -0.15 | Destabilizing | 0.988 | D | 0.348 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.