Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7633 | 23122;23123;23124 | chr2:178721122;178721121;178721120 | chr2:179585849;179585848;179585847 |
N2AB | 7316 | 22171;22172;22173 | chr2:178721122;178721121;178721120 | chr2:179585849;179585848;179585847 |
N2A | 6389 | 19390;19391;19392 | chr2:178721122;178721121;178721120 | chr2:179585849;179585848;179585847 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1247821028 | None | 0.051 | N | 0.143 | 0.158 | 0.211220785272 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.087 | likely_benign | 0.0969 | benign | -0.273 | Destabilizing | 0.525 | D | 0.267 | neutral | None | None | None | None | N |
S/C | 0.2271 | likely_benign | 0.2856 | benign | -0.349 | Destabilizing | 0.997 | D | 0.32 | neutral | N | 0.493863219 | None | None | N |
S/D | 0.714 | likely_pathogenic | 0.7759 | pathogenic | 0.559 | Stabilizing | 0.728 | D | 0.301 | neutral | None | None | None | None | N |
S/E | 0.7852 | likely_pathogenic | 0.8443 | pathogenic | 0.539 | Stabilizing | 0.842 | D | 0.313 | neutral | None | None | None | None | N |
S/F | 0.2569 | likely_benign | 0.3155 | benign | -0.687 | Destabilizing | 0.974 | D | 0.41 | neutral | None | None | None | None | N |
S/G | 0.1014 | likely_benign | 0.1185 | benign | -0.465 | Destabilizing | 0.005 | N | 0.091 | neutral | N | 0.476110183 | None | None | N |
S/H | 0.5456 | ambiguous | 0.6306 | pathogenic | -0.826 | Destabilizing | 0.974 | D | 0.335 | neutral | None | None | None | None | N |
S/I | 0.2007 | likely_benign | 0.2356 | benign | 0.111 | Stabilizing | 0.934 | D | 0.392 | neutral | N | 0.502352635 | None | None | N |
S/K | 0.8642 | likely_pathogenic | 0.9116 | pathogenic | -0.203 | Destabilizing | 0.067 | N | 0.129 | neutral | None | None | None | None | N |
S/L | 0.1052 | likely_benign | 0.1206 | benign | 0.111 | Stabilizing | 0.728 | D | 0.385 | neutral | None | None | None | None | N |
S/M | 0.2291 | likely_benign | 0.2538 | benign | -0.012 | Destabilizing | 0.991 | D | 0.331 | neutral | None | None | None | None | N |
S/N | 0.2356 | likely_benign | 0.2636 | benign | -0.189 | Destabilizing | 0.051 | N | 0.143 | neutral | N | 0.516167294 | None | None | N |
S/P | 0.887 | likely_pathogenic | 0.9014 | pathogenic | 0.017 | Stabilizing | 0.974 | D | 0.369 | neutral | None | None | None | None | N |
S/Q | 0.6755 | likely_pathogenic | 0.7603 | pathogenic | -0.244 | Destabilizing | 0.949 | D | 0.367 | neutral | None | None | None | None | N |
S/R | 0.7641 | likely_pathogenic | 0.8458 | pathogenic | -0.162 | Destabilizing | 0.669 | D | 0.359 | neutral | N | 0.504699507 | None | None | N |
S/T | 0.0856 | likely_benign | 0.0904 | benign | -0.233 | Destabilizing | 0.022 | N | 0.095 | neutral | N | 0.417464524 | None | None | N |
S/V | 0.2343 | likely_benign | 0.267 | benign | 0.017 | Stabilizing | 0.728 | D | 0.368 | neutral | None | None | None | None | N |
S/W | 0.4842 | ambiguous | 0.6065 | pathogenic | -0.751 | Destabilizing | 0.998 | D | 0.479 | neutral | None | None | None | None | N |
S/Y | 0.3138 | likely_benign | 0.3987 | ambiguous | -0.402 | Destabilizing | 0.991 | D | 0.408 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.