Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC763523128;23129;23130 chr2:178721116;178721115;178721114chr2:179585843;179585842;179585841
N2AB731822177;22178;22179 chr2:178721116;178721115;178721114chr2:179585843;179585842;179585841
N2A639119396;19397;19398 chr2:178721116;178721115;178721114chr2:179585843;179585842;179585841
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCC
  • RefSeq wild type template codon: AGG
  • Domain: Ig-61
  • Domain position: 28
  • Structural Position: 41
  • Q(SASA): 0.4937
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/F rs1268436239 -0.833 0.992 N 0.586 0.399 0.817150913411 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.9E-06 0
S/F rs1268436239 -0.833 0.992 N 0.586 0.399 0.817150913411 gnomAD-4.0.0 2.05336E-06 None None None None I None 0 0 None 0 2.51953E-05 None 0 0 1.79957E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.1943 likely_benign 0.1528 benign -0.06 Destabilizing 0.065 N 0.301 neutral N 0.486186536 None None I
S/C 0.4314 ambiguous 0.3136 benign -0.46 Destabilizing 0.997 D 0.451 neutral N 0.495051307 None None I
S/D 0.7841 likely_pathogenic 0.7541 pathogenic -0.046 Destabilizing 0.857 D 0.344 neutral None None None None I
S/E 0.8578 likely_pathogenic 0.8018 pathogenic -0.148 Destabilizing 0.893 D 0.352 neutral None None None None I
S/F 0.2573 likely_benign 0.2078 benign -0.806 Destabilizing 0.992 D 0.586 neutral N 0.521573114 None None I
S/G 0.3088 likely_benign 0.3016 benign -0.101 Destabilizing 0.821 D 0.319 neutral None None None None I
S/H 0.6306 likely_pathogenic 0.5348 ambiguous -0.357 Destabilizing 0.999 D 0.453 neutral None None None None I
S/I 0.3122 likely_benign 0.2308 benign -0.083 Destabilizing 0.987 D 0.581 neutral None None None None I
S/K 0.948 likely_pathogenic 0.911 pathogenic -0.395 Destabilizing 0.957 D 0.345 neutral None None None None I
S/L 0.1569 likely_benign 0.1355 benign -0.083 Destabilizing 0.918 D 0.551 neutral None None None None I
S/M 0.3095 likely_benign 0.2574 benign -0.214 Destabilizing 0.998 D 0.455 neutral None None None None I
S/N 0.3601 ambiguous 0.2942 benign -0.179 Destabilizing 0.413 N 0.389 neutral None None None None I
S/P 0.9138 likely_pathogenic 0.9198 pathogenic -0.051 Destabilizing 0.014 N 0.253 neutral N 0.514965987 None None I
S/Q 0.82 likely_pathogenic 0.7306 pathogenic -0.384 Destabilizing 0.994 D 0.421 neutral None None None None I
S/R 0.9317 likely_pathogenic 0.8857 pathogenic -0.121 Destabilizing 0.994 D 0.457 neutral None None None None I
S/T 0.1089 likely_benign 0.1071 benign -0.274 Destabilizing 0.001 N 0.155 neutral N 0.455905482 None None I
S/V 0.3469 ambiguous 0.2544 benign -0.051 Destabilizing 0.808 D 0.551 neutral None None None None I
S/W 0.5466 ambiguous 0.4976 ambiguous -0.923 Destabilizing 0.999 D 0.635 neutral None None None None I
S/Y 0.2937 likely_benign 0.2399 benign -0.588 Destabilizing 0.997 D 0.585 neutral N 0.509451966 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.