Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7635 | 23128;23129;23130 | chr2:178721116;178721115;178721114 | chr2:179585843;179585842;179585841 |
N2AB | 7318 | 22177;22178;22179 | chr2:178721116;178721115;178721114 | chr2:179585843;179585842;179585841 |
N2A | 6391 | 19396;19397;19398 | chr2:178721116;178721115;178721114 | chr2:179585843;179585842;179585841 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1268436239 | -0.833 | 0.992 | N | 0.586 | 0.399 | 0.817150913411 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/F | rs1268436239 | -0.833 | 0.992 | N | 0.586 | 0.399 | 0.817150913411 | gnomAD-4.0.0 | 2.05336E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 1.79957E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1943 | likely_benign | 0.1528 | benign | -0.06 | Destabilizing | 0.065 | N | 0.301 | neutral | N | 0.486186536 | None | None | I |
S/C | 0.4314 | ambiguous | 0.3136 | benign | -0.46 | Destabilizing | 0.997 | D | 0.451 | neutral | N | 0.495051307 | None | None | I |
S/D | 0.7841 | likely_pathogenic | 0.7541 | pathogenic | -0.046 | Destabilizing | 0.857 | D | 0.344 | neutral | None | None | None | None | I |
S/E | 0.8578 | likely_pathogenic | 0.8018 | pathogenic | -0.148 | Destabilizing | 0.893 | D | 0.352 | neutral | None | None | None | None | I |
S/F | 0.2573 | likely_benign | 0.2078 | benign | -0.806 | Destabilizing | 0.992 | D | 0.586 | neutral | N | 0.521573114 | None | None | I |
S/G | 0.3088 | likely_benign | 0.3016 | benign | -0.101 | Destabilizing | 0.821 | D | 0.319 | neutral | None | None | None | None | I |
S/H | 0.6306 | likely_pathogenic | 0.5348 | ambiguous | -0.357 | Destabilizing | 0.999 | D | 0.453 | neutral | None | None | None | None | I |
S/I | 0.3122 | likely_benign | 0.2308 | benign | -0.083 | Destabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | I |
S/K | 0.948 | likely_pathogenic | 0.911 | pathogenic | -0.395 | Destabilizing | 0.957 | D | 0.345 | neutral | None | None | None | None | I |
S/L | 0.1569 | likely_benign | 0.1355 | benign | -0.083 | Destabilizing | 0.918 | D | 0.551 | neutral | None | None | None | None | I |
S/M | 0.3095 | likely_benign | 0.2574 | benign | -0.214 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | I |
S/N | 0.3601 | ambiguous | 0.2942 | benign | -0.179 | Destabilizing | 0.413 | N | 0.389 | neutral | None | None | None | None | I |
S/P | 0.9138 | likely_pathogenic | 0.9198 | pathogenic | -0.051 | Destabilizing | 0.014 | N | 0.253 | neutral | N | 0.514965987 | None | None | I |
S/Q | 0.82 | likely_pathogenic | 0.7306 | pathogenic | -0.384 | Destabilizing | 0.994 | D | 0.421 | neutral | None | None | None | None | I |
S/R | 0.9317 | likely_pathogenic | 0.8857 | pathogenic | -0.121 | Destabilizing | 0.994 | D | 0.457 | neutral | None | None | None | None | I |
S/T | 0.1089 | likely_benign | 0.1071 | benign | -0.274 | Destabilizing | 0.001 | N | 0.155 | neutral | N | 0.455905482 | None | None | I |
S/V | 0.3469 | ambiguous | 0.2544 | benign | -0.051 | Destabilizing | 0.808 | D | 0.551 | neutral | None | None | None | None | I |
S/W | 0.5466 | ambiguous | 0.4976 | ambiguous | -0.923 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
S/Y | 0.2937 | likely_benign | 0.2399 | benign | -0.588 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.509451966 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.