Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7643 | 23152;23153;23154 | chr2:178721092;178721091;178721090 | chr2:179585819;179585818;179585817 |
N2AB | 7326 | 22201;22202;22203 | chr2:178721092;178721091;178721090 | chr2:179585819;179585818;179585817 |
N2A | 6399 | 19420;19421;19422 | chr2:178721092;178721091;178721090 | chr2:179585819;179585818;179585817 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs1236884479 | None | 0.999 | N | 0.724 | 0.394 | 0.692523172946 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/C | rs1236884479 | None | 0.999 | N | 0.724 | 0.394 | 0.692523172946 | gnomAD-4.0.0 | 6.5716E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/L | rs1220233806 | -1.726 | 0.885 | N | 0.487 | 0.253 | 0.502379540653 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
F/L | rs1220233806 | -1.726 | 0.885 | N | 0.487 | 0.253 | 0.502379540653 | gnomAD-4.0.0 | 1.59267E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.907 | likely_pathogenic | 0.9627 | pathogenic | -2.693 | Highly Destabilizing | 0.953 | D | 0.623 | neutral | None | None | None | None | N |
F/C | 0.7146 | likely_pathogenic | 0.816 | pathogenic | -1.63 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | N | 0.504755094 | None | None | N |
F/D | 0.957 | likely_pathogenic | 0.9855 | pathogenic | -2.012 | Highly Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
F/E | 0.9474 | likely_pathogenic | 0.9813 | pathogenic | -1.898 | Destabilizing | 0.993 | D | 0.745 | deleterious | None | None | None | None | N |
F/G | 0.9355 | likely_pathogenic | 0.9745 | pathogenic | -3.046 | Highly Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/H | 0.5881 | likely_pathogenic | 0.743 | pathogenic | -1.302 | Destabilizing | 0.986 | D | 0.704 | prob.neutral | None | None | None | None | N |
F/I | 0.5421 | ambiguous | 0.7298 | pathogenic | -1.593 | Destabilizing | 0.982 | D | 0.6 | neutral | N | 0.457226278 | None | None | N |
F/K | 0.8555 | likely_pathogenic | 0.9486 | pathogenic | -1.47 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
F/L | 0.9212 | likely_pathogenic | 0.9633 | pathogenic | -1.593 | Destabilizing | 0.885 | D | 0.487 | neutral | N | 0.470311135 | None | None | N |
F/M | 0.7601 | likely_pathogenic | 0.8598 | pathogenic | -1.381 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
F/N | 0.8231 | likely_pathogenic | 0.9187 | pathogenic | -1.553 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
F/P | 0.9994 | likely_pathogenic | 0.9998 | pathogenic | -1.96 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
F/Q | 0.8529 | likely_pathogenic | 0.9367 | pathogenic | -1.699 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
F/R | 0.7555 | likely_pathogenic | 0.8886 | pathogenic | -0.765 | Destabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | N |
F/S | 0.7635 | likely_pathogenic | 0.8968 | pathogenic | -2.355 | Highly Destabilizing | 0.991 | D | 0.706 | prob.neutral | N | 0.47795197 | None | None | N |
F/T | 0.8555 | likely_pathogenic | 0.9444 | pathogenic | -2.149 | Highly Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/V | 0.5742 | likely_pathogenic | 0.7533 | pathogenic | -1.96 | Destabilizing | 0.939 | D | 0.581 | neutral | N | 0.455415852 | None | None | N |
F/W | 0.4698 | ambiguous | 0.6054 | pathogenic | -0.515 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
F/Y | 0.1008 | likely_benign | 0.1225 | benign | -0.771 | Destabilizing | 0.02 | N | 0.244 | neutral | N | 0.39669881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.